AB164375.1 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). [GOC:jl, ISBN:0198506732]
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). [GOC:jl]
GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. [GOC:curators, ISBN:0198547684]
GO:0003824	catalytic activity
INTERPRO:IPR018088	Chalcone/stilbene_synthase_AS
INTERPRO:IPR011141	Polyketide_synthase_type-III
INTERPRO:IPR016039	Thiolase-like
INTERPRO:IPR012328	Chalcone/stilbene_synt_C
INTERPRO:IPR001099	Chalcone/stilbene_synt_N

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of AB164375.1 vs. Genbank
Match Name: CM010798.2
Description: Cannabis sativa cultivar Purple Kush chromosome 9, whole genome shotgun sequence

HSP 1 Score: 1794.22 bits (971), Expect = 0.000e+0
Identity = 991/1001 (99.00%), Postives = 991/1001 (99.00%), Query Frame = 1

Query:      158 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46184561 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGTTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 46185561

HSP 2 Score: 1760.98 bits (953), Expect = 0.000e+0
Identity = 985/1001 (98.40%), Postives = 985/1001 (98.40%), Query Frame = 1

Query:      158 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46201592 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAATCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 46200592

HSP 3 Score: 569.888 bits (308), Expect = 2.815e-160
Identity = 713/910 (78.35%), Postives = 713/910 (78.35%), Query Frame = 1

Query:      254 ATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACCCAA---GTCTAAAATCACTCATTTAATCTT---CACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACT-GAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTAC-TAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGA-GGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGA-TTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAA 1151
                |||||||||||  |||||||||    |||||||| || ||||| || || ||| |  ||  |||||||||||||||||||| ||||||||    ||||| ||||| ||| |||||||   ||| |  |  ||    |  || ||||||||||| |||||||||||||| |||||||||| ||| ||  ||  | || |||||||||||| |||||||||  || ||| | || || ||||||||||||||| | || |||||  ||||||||||||||||||| || ||||||||||| ||||||| ||| || ||||||| | |||||||||||||| |  ||||| |  | |  || | | |||||||||||| | ||||| ||||| ||| | || || |||||||| ||||||||| |||||||| | |||||||| || ||||||||||| || ||| ||| |||||| ||||| |||||||| ||   | | ||    ||| || | ||||||   ||  ||| |||||| |||| ||| ||||| | | ||||||| ||||| || ||||||||  ||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||   | ||||| || |   |||||| |  ||| || ||  | ||||  || ||||| |   | ||||||| ||||| | |||||| |||| || ||||| ||||||  ||| || ||| | |||||||| ||||| ||||| |||||| |||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| || || | | | ||| | | ||||||  |||||||
Sbjct: 46172142 ATGCACGTCAATCCATGTTGGTCACAGAGGTTCCCAAGCTTGGAAAAGAAGCT-G-CCATGAAGGCCATCAAAGAATGGGGACAACCCAACAAATCTAAGATCACACATCTAATCTTTTGCACCA-TG--TCCGGTATCGATATGCCCGGTGCCGACTACCATTGCGCAAAGCTTCTCGAACTCGA-ACCAACCGTAAAGCGTGTGATGTTGTATCAACACGGTTGTCACGGCGGCGGAACCGTTCTACGCCTCGCAAAGGATTTAGCAGAGAATAACAAAGGTGCTCGAGTTCTCGCTGTGTGTTCTGATATCATGGCTTTCATGTTTCGTGGGCCTACTAAGTCTCATTTAG-CTTCCATGGTGGGACAAGCTTTGTTTGGAGATGGAGCTTCAGCAGTTATTGTTGGTGCTGAACCCAATGAGTCAATGGGGGAAAGACCCATATTTGAGTTAGTATCAGCTGCGCAAACGATCTTGCCAAACTCAGACAAAGCCATCATTGGAAATGTTAGGGAAATGGGGTTGACATTTGACTTACGTAAAGATGTTCATTTGTTGATTTCTAACAACATTGAGAAGAGTTTGATGGAGGCATTCACTCCAATTGGGATTAGTGATTGGAACTCCTTATTTTGGATTACACATCCAGGTGGACCAACTATTCTGAATGCAGTGGAAGCTGAACTT-CAGTTGAAGAAAGAGAAGTT-GGAAATTTCACGTTATGTGTTAAGTGAGTATGGAAACATGTCGAGCTCATGTGTGTTTTTTATAATGGATGAATTGAGAAAGAGATCGTTGAAGGAAGGGAAATCCACCACTGGGGATGGGTTTGAGTGGGGTGTTCTTTTTGGGTTTGGCCCTGGCTTGACAGTTGAGACACTAGTCTTACATAGTGTGGCCATCAA 46171242

HSP 4 Score: 272.578 bits (147), Expect = 8.889e-71
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 159
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46184243 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 46184401

HSP 5 Score: 272.578 bits (147), Expect = 8.889e-71
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 159
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46201912 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 46201754

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BLAST of AB164375.1 vs. Genbank
Match Name: AGQN03000870.1
Description: Cannabis sativa cultivar Purple Kush 000870F, whole genome shotgun sequence

HSP 1 Score: 1777.6 bits (962), Expect = 0.000e+0
Identity = 988/1001 (98.70%), Postives = 988/1001 (98.70%), Query Frame = 1

Query:      158 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct:    31461 GTGACAAAAGTATGATAAGGAAACGTAACTATTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTCTGGTGATGGGGCTGCTGCGGTTATTGTTGGAGCTGAACCCGATGAGTCAGTTGGCGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAGACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATATACATAAAGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTAGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTTTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGAGCAGGTTTGACTGTCGAAACAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 30461

HSP 2 Score: 272.578 bits (147), Expect = 8.889e-71
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 159
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    31769 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 31611

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BLAST of AB164375.1 vs. Genbank
Match Name: CM010795.2
Description: Cannabis sativa cultivar Purple Kush chromosome 8, whole genome shotgun sequence

HSP 1 Score: 420.31 bits (227), Expect = 3.000e-115
Identity = 681/903 (75.42%), Postives = 681/903 (75.42%), Query Frame = 1

Query:      262 CAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCG-GTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAA-CTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCT-AAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTA--G-CT-CAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATAT 1155
                |||||||||||||| ||||||||||| |||||||| ||||| ||| |  ||  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||   | | | || |  | |||||||||  |||| |||||||| ||||| || ||||| || || |   |||| ||||||||||||||| || | |||||||||||||| |||||||| || ||||| ||  | || || ||  | || || || ||||| ||||| || |||||||| |||||    || || |   ||| |   || |  ||||| || || ||  |  | ||||   | |||||||| ||| | ||||| ||||||||| | | |  | ||||| || ||||| || ||||  ||| | || ||||  ||||| ||||||||||||||  | |  ||||| || || ||  || |||| |  | | ||   |||| || |||||||||| ||  ||||| || ||||   ||| ||||||||   | ||||||| ||||| ||||||||||| || ||||| || || |||||  ||||||| ||||| ||||||||| ||||||||||| | ||||| ||||||  ||| ||||||||   |||||| |  ||| | || ||   | || || ||| |   ||   | ||||| ||| ||||||||  ||| |||||| |    | || ||| | ||||  | | ||  |||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||| ||||| |||||||||||||| || |  || ||  | || || ||| ||||||| |||
Sbjct:  4095108 CAAGACATGTTGGTCGTTGAGGTTCCTAAACTTGGAAAGGAGGCT-G-CCATGAAGGCCATCAAAGAATGGGGTCAGCCCAAGTCTAAAATCACTCATTTAGTCTTCTGCACCACCTCCAGTATTGACATGCCTAGTGCTGACTACCAATGCGCCAAACTTCTTGGCCTCAACACCTCCGTGAAGCGTGTGATGTTGCACCAACTAGGCTGTTACGGTGGTGGTACAGTTCTTCGGGTGGCTAAAGATTTGGCGGAAAACAACAAGGGCGCTCGTGTTCTCGCGGTGTGCACAGAGATCACAACTTCCACATTCCACGGGCCCTCCGAATCCAATTTGGAATGCTTGGTGGGACAGGCTCTATTTGGAGATGGGGCTTC-GTGTCTCATTGTGGGGGCTGATCCGGATGCCTCATTAGGAGAAAAACCGATCTTTGAGTTGGTGTCGGCAGCACAAACGATGTTGCCTGACACGGA-GACAGCGATCAAGGGAGATTTAAGGGAAGCCGGGTTGATAATTAATTTGAGTAAAGATGTGCCCGAGCTGATCTCCAATAACATTGAGAAATGCTTAATTGATGCTTTCACTCCACTTGGGATAAGTGACTGGAACTCCTTATTTTGGATTGCGCACCCGGGTGGGCGAGCAATTTTGGATGCAGTGGAAGCCAAGCTCCAGCTGCGAAAG-GACAAGATGAGGGCCACTCGTCACGTGATGAGTGAGTTTGGAAATATGGCAGGTGCCTGCAA-TTTCTTCATAG-TA--GATGAGATGAGGAAGAAGTCTTTGGAGGAAGGGAAGTCTACCACTGGAGAAGGACTAGAGTGGGGTGTTCTCTTTGGATTTGGGCCAGGTTTGACTGTGGAGACTGTTGTGCTACGCAGCGTTGCCATCAA-TAT 4094216


Match Name	Summary
CM010798.2	E-Value: 2.815e-160, PID: 99.00 Description: Cannabis sativa cultivar Purple Kush chromosome 9, whole genome shotgun sequence [more]
AGQN03000870.1	E-Value: 8.889e-71, PID: 98.70 Description: Cannabis sativa cultivar Purple Kush 000870F, whole genome shotgun sequence [more]
CM010795.2	E-Value: 3.000e-115, PID: 75.42 Description: Cannabis sativa cultivar Purple Kush chromosome 8, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of AB164375.1 vs. Genbank
Match Name: PKGMv1-20508_t
Description: No definition line

HSP 1 Score: 1788.68 bits (968), Expect = 0.000e+0
Identity = 1068/1112 (96.04%), Postives = 1068/1112 (96.04%), Query Frame = 1

Query:       21 GGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCG 1132
                |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||                        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      294 GGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAA------------------------TATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAATCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCG 1381

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BLAST of AB164375.1 vs. Genbank
Match Name: PKGMv1-20507_t
Description: No definition line

HSP 1 Score: 1773.9 bits (960), Expect = 0.000e+0
Identity = 980/990 (98.99%), Postives = 980/990 (98.99%), Query Frame = 1

Query:      169 ATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:        1 ATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGTTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 990

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BLAST of AB164375.1 vs. Genbank
Match Name: PKGMv1-20505_t
Description: No definition line

HSP 1 Score: 569.888 bits (308), Expect = 3.714e-161
Identity = 713/910 (78.35%), Postives = 713/910 (78.35%), Query Frame = 1

Query:      254 ATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACC---CAAGTCTAAAATCACTCATTTAATCTT---CACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACT-GAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTAC-TAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGA-GGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGA-TTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAA 1151
                |||||||||||  |||||||||    |||||||| || ||||| || || ||| |  ||  |||||||||||||||||||| |||||   ||| ||||| ||||| ||| |||||||   ||| |  |  ||    |  || ||||||||||| |||||||||||||| |||||||||| ||| ||  ||  | || |||||||||||| |||||||||  || ||| | || || ||||||||||||||| | || |||||  ||||||||||||||||||| || ||||||||||| ||||||| ||| || ||||||| | |||||||||||||| |  ||||| |  | |  || | | |||||||||||| | ||||| ||||| ||| | || || |||||||| ||||||||| |||||||| | |||||||| || ||||||||||| || ||| ||| |||||| ||||| |||||||| ||   | | ||    ||| || | ||||||   ||  ||| |||||| |||| ||| ||||| | | ||||||| ||||| || ||||||||  ||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||   | ||||| || |   |||||| |  ||| || ||  | ||||  || ||||| |   | ||||||| ||||| | |||||| |||| || ||||| ||||||  ||| || ||| | |||||||| ||||| ||||| |||||| |||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| || || | | | ||| | | ||||||  |||||||
Sbjct:      497 ATGCACGTCAATCCATGTTGGTCACAGAGGTTCCCAAGCTTGGAAAAGAAGCT-G-CCATGAAGGCCATCAAAGAATGGGGACAACCCAACAAATCTAAGATCACACATCTAATCTTTTGCACCA-TG--TCCGGTATCGATATGCCCGGTGCCGACTACCATTGCGCAAAGCTTCTCGAACTCGA-ACCAACCGTAAAGCGTGTGATGTTGTATCAACACGGTTGTCACGGCGGCGGAACCGTTCTACGCCTCGCAAAGGATTTAGCAGAGAATAACAAAGGTGCTCGAGTTCTCGCTGTGTGTTCTGATATCATGGCTTTCATGTTTCGTGGGCCTACTAAGTCTCATTTAG-CTTCCATGGTGGGACAAGCTTTGTTTGGAGATGGAGCTTCAGCAGTTATTGTTGGTGCTGAACCCAATGAGTCAATGGGGGAAAGACCCATATTTGAGTTAGTATCAGCTGCGCAAACGATCTTGCCAAACTCAGACAAAGCCATCATTGGAAATGTTAGGGAAATGGGGTTGACATTTGACTTACGTAAAGATGTTCATTTGTTGATTTCTAACAACATTGAGAAGAGTTTGATGGAGGCATTCACTCCAATTGGGATTAGTGATTGGAACTCCTTATTTTGGATTACACATCCAGGTGGACCAACTATTCTGAATGCAGTGGAAGCTGAACTT-CAGTTGAAGAAAGAGAAGTT-GGAAATTTCACGTTATGTGTTAAGTGAGTATGGAAACATGTCGAGCTCATGTGTGTTTTTTATAATGGATGAATTGAGAAAGAGATCGTTGAAGGAAGGGAAATCCACCACTGGGGATGGGTTTGAGTGGGGTGTTCTTTTTGGGTTTGGCCCTGGCTTGACAGTTGAGACACTAGTCTTACATAGTGTGGCCATCAA 1397

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BLAST of AB164375.1 vs. Genbank
Match Name: PKGMv1-34274_t
Description: No definition line

HSP 1 Score: 420.31 bits (227), Expect = 3.959e-116
Identity = 681/903 (75.42%), Postives = 681/903 (75.42%), Query Frame = 1

Query:      262 CAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCG-GTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAA-CTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCT-AAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTA--G-CT-CAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATAT 1155
                |||||||||||||| ||||||||||| |||||||| ||||| ||| |  ||  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||   | | | || |  | |||||||||  |||| |||||||| ||||| || ||||| || || |   |||| ||||||||||||||| || | |||||||||||||| |||||||| || ||||| ||  | || || ||  | || || || ||||| ||||| || |||||||| |||||    || || |   ||| |   || |  ||||| || || ||  |  | ||||   | |||||||| ||| | ||||| ||||||||| | | |  | ||||| || ||||| || ||||  ||| | || ||||  ||||| ||||||||||||||  | |  ||||| || || ||  || |||| |  | | ||   |||| || |||||||||| ||  ||||| || ||||   ||| ||||||||   | ||||||| ||||| ||||||||||| || ||||| || || |||||  ||||||| ||||| ||||||||| ||||||||||| | ||||| ||||||  ||| ||||||||   |||||| |  ||| | || ||   | || || ||| |   ||   | ||||| ||| ||||||||  ||| |||||| |    | || ||| | ||||  | | ||  |||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||| ||||| |||||||||||||| || |  || ||  | || || ||| ||||||| |||
Sbjct:      133 CAAGACATGTTGGTCGTTGAGGTTCCTAAACTTGGAAAGGAGGCT-G-CCATGAAGGCCATCAAAGAATGGGGTCAGCCCAAGTCTAAAATCACTCATTTAGTCTTCTGCACCACCTCCAGTATTGACATGCCTAGTGCTGACTACCAATGCGCCAAACTTCTTGGCCTCAACACCTCCGTGAAGCGTGTGATGTTGCACCAACTAGGCTGTTACGGTGGTGGTACAGTTCTTCGGGTGGCTAAAGATTTGGCGGAAAACAACAAGGGCGCTCGTGTTCTCGCGGTGTGCACAGAGATCACAACTTCCACATTCCACGGGCCCTCCGAATCCAATTTGGAATGCTTGGTGGGACAGGCTCTATTTGGAGATGGGGCTTC-GTGTCTCATTGTGGGGGCTGATCCGGATGCCTCATTAGGAGAAAAACCGATCTTTGAGTTGGTGTCGGCAGCACAAACGATGTTGCCTGACACGGA-GACAGCGATCAAGGGAGATTTAAGGGAAGCCGGGTTGATAATTAATTTGAGTAAAGATGTGCCCGAGCTGATCTCCAATAACATTGAGAAATGCTTAATTGATGCTTTCACTCCACTTGGGATAAGTGACTGGAACTCCTTATTTTGGATTGCGCACCCGGGTGGGCGAGCAATTTTGGATGCAGTGGAAGCCAAGCTCCAGCTGCGAAAG-GACAAGATGAGGGCCACTCGTCACGTGATGAGTGAGTTTGGAAATATGGCAGGTGCCTGCAA-TTTCTTCATAG-TA--GATGAGATGAGGAAGAAGTCTTTGGAGGAAGGGAAGTCTACCACTGGAGAAGGACTAGAGTGGGGTGTTCTCTTTGGATTTGGGCCAGGTTTGACTGTGGAGACTGTTGTGCTACGCAGCGTTGCCATCAA-TAT 1025


Match Name	Summary
PKGMv1-20508_t	E-Value: 0.000e+0, PID: 96.04 Description: No definition line [more]
PKGMv1-20507_t	E-Value: 0.000e+0, PID: 98.99 Description: No definition line [more]
PKGMv1-20505_t	E-Value: 3.714e-161, PID: 78.35 Description: No definition line [more]
PKGMv1-34274_t	E-Value: 3.959e-116, PID: 75.42 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of AB164375.1 vs. Genbank
Match Name: NC_044379.1
Description: Cannabis sativa chromosome 8, cs10, whole genome shotgun sequence

HSP 1 Score: 1766.52 bits (956), Expect = 0.000e+0
Identity = 986/1001 (98.50%), Postives = 986/1001 (98.50%), Query Frame = 1

Query:      158 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56862084 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTTATTGTTGGAGCTGAACCCGATGAGTCAGTTGGCGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAGACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAATCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 56863084

HSP 2 Score: 1766.52 bits (956), Expect = 0.000e+0
Identity = 986/1001 (98.50%), Postives = 986/1001 (98.50%), Query Frame = 1

Query:      158 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56878906 GTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 56877906

HSP 3 Score: 569.888 bits (308), Expect = 2.765e-160
Identity = 713/910 (78.35%), Postives = 713/910 (78.35%), Query Frame = 1

Query:      254 ATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACC---CAAGTCTAAAATCACTCATTTAATCTT---CACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACT-GAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTAC-TAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGA-GGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGA-TTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAA 1151
                |||||||||||  |||||||||    |||||||| || ||||| || || ||| |  ||  |||||||||||||||||||| |||||   ||| ||||| ||||| ||| |||||||   ||| |  |  ||    |  || ||||||||||| |||||||||||||| |||||||||| ||| ||  ||  | || |||||||||||| |||||||||  || ||| | || || ||||||||||||||| | || |||||  ||||||||||||||||||| || ||||||||||| ||||||| ||| || ||||||| | |||||||||||||| |  ||||| |  | |  || | | |||||||||||| | ||||| ||||| ||| | || || |||||||| ||||||||| |||||||| | |||||||| || ||||||||||| || ||| ||| |||||| ||||| |||||||| ||   | | ||    ||| || | ||||||   ||  ||| |||||| |||| ||| ||||| | | ||||||| ||||| || ||||||||  ||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||   | ||||| || |   |||||| |  ||| || ||  | ||||  || ||||| |   | ||||||| ||||| | |||||| |||| || ||||| ||||||  ||| || ||| | |||||||| ||||| ||||| |||||| |||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| || || | | | ||| | | ||||||  |||||||
Sbjct: 56896422 ATGCACGTCAATCCATGTTGGTCACAGAGGTTCCCAAGCTTGGAAAAGAAGCT-G-CCATGAAGGCCATCAAAGAATGGGGACAACCCAACAAATCTAAGATCACACATCTAATCTTTTGCACCA-TG--TCCGGTATCGATATGCCCGGTGCCGACTACCATTGCGCAAAGCTTCTCGAACTCGA-ACCAACCGTAAAGCGTGTGATGTTGTATCAACACGGTTGTCACGGCGGCGGAACCGTTCTACGCCTCGCAAAGGATTTAGCAGAGAATAACAAAGGTGCTCGAGTTCTCGCTGTGTGTTCTGATATCATGGCTTTCATGTTTCGTGGGCCTACTAAGTCTCATTTAG-CTTCCATGGTGGGACAAGCTTTGTTTGGAGATGGAGCTTCAGCAGTTATTGTTGGTGCTGAACCCAATGAGTCAATGGGGGAAAGACCCATATTTGAGTTAGTATCAGCTGCGCAAACGATCTTGCCAAACTCAGACAAAGCCATCATTGGAAATGTTAGGGAAATGGGGTTGACATTTGACTTACGTAAAGATGTTCATTTGTTGATTTCTAACAACATTGAGAAGAGTTTGATGGAGGCATTCACTCCAATTGGGATTAGTGATTGGAACTCCTTATTTTGGATTACACATCCAGGTGGACCAACTATTCTGAATGCAGTGGAAGCTGAACTT-CAGTTGAAGAAAGAGAAGTT-GGAAATTTCACGTTATGTGTTAAGTGAGTATGGAAACATGTCGAGCTCATGTGTGTTTTTTATAATGGATGAATTGAGAAAGAGATCGTTGAAGGAAGGGAAATCCACCACTGGGGATGGGTTTGAGTGGGGTGTTCTTTTTGGGTTTGGCCCTGGCTTGACAGTTGAGACACTAGTCTTACATAGTGTGGCCATCAA 56897322

HSP 4 Score: 272.578 bits (147), Expect = 8.733e-71
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 159
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56861764 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 56861922

HSP 5 Score: 272.578 bits (147), Expect = 8.733e-71
Identity = 155/159 (97.48%), Postives = 155/159 (97.48%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 159
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56879228 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGT 56879070


Match Name	Summary
NC_044379.1	E-Value: 2.765e-160, PID: 98.50 Description: Cannabis sativa chromosome 8, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of AB164375.1 vs. Genbank
Match Name: XM_030628326.1
Description: PREDICTED: Cannabis sativa polyketide synthase 4-like (LOC115700696), mRNA

HSP 1 Score: 2034.28 bits (1101), Expect = 0.000e+0
Identity = 1139/1158 (98.36%), Postives = 1139/1158 (98.36%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      129 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTTATTGTTGGAGCTGAACCCGATGAGTCAGTTGGCGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAGACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAATCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1286

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BLAST of AB164375.1 vs. Genbank
Match Name: XM_030626629.1
Description: PREDICTED: Cannabis sativa polyketide synthase 4-like (LOC115699293), mRNA

HSP 1 Score: 2034.28 bits (1101), Expect = 0.000e+0
Identity = 1139/1158 (98.36%), Postives = 1139/1158 (98.36%), Query Frame = 1

Query:        1 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1158
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:       98 ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATCGGCACCGCCAATCCGGAGAACATTTTAATACAAGATGAGTTTCCTGACTACTACTTTCGGGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACATCTAAAGCAAAACCCAAGATTGGCGGAGCACGAGATGCAAACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAATCACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACTCAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTCTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGATTCTGACCTCGAATTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCTGTCATTGTTGGAGCCGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTAGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCTATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGGATCTGAAGAAGGAGAAGTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAAATATTAA 1255

[Close]

BLAST of AB164375.1 vs. Genbank
Match Name: XM_030626628.1
Description: PREDICTED: Cannabis sativa phloroisovalerophenone synthase (LOC115699292), mRNA

HSP 1 Score: 627.135 bits (339), Expect = 1.208e-178
Identity = 890/1157 (76.92%), Postives = 890/1157 (76.92%), Query Frame = 1

Query:       13 CGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCACCGCCAATCCGGAGAACATTTTATTA--CAAGATGAGTTTCCTGACTACTATTTTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGAAAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGAAGAACACCTAAAGCAAAACCCAAGATTGGTG-GAGCACGAGAT-GCA--AACTCTGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAGGATGCTTGTGCA--AAGGCCATCAAAGAATGGGGTCAACC---CAAGTCTAAAATCACTCATTTAATCTT---CACTAGCGCATCAACCACTGACATGCCCGGTGCAGACTACCATTGCGCTAAGCTTCTCGGACT-GAGTCCCTCAGTGAAGCGTGTGATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGCCAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTTGTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAATTAC-TAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGTTGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGGTGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGACATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTATGTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTATTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGGAAAGCTATTTTGGACAAAGTGGA-GGAGAAGTTGCATCTAAAGAGTGATAAGTTTGTGGA-TTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCTCAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAAGGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTTTGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCAA 1151
                ||||||||   ||||||| || |||||||||| ||||| ||||||||||   | ||||| | |  |||| | | | ||| || ||||| ||   ||||||||||||  ||||||||||| | |||||| | ||||||| | | |||||| | || |  |  ||||| |||||| ||     |||| |||||||  |  | |||||||||||||   | ||| ||| ||   || |||  | | ||  |||||||||||  |||||||||    |||||||| || ||||| || || ||| |  ||  |||||||||||||||||||| |||||   ||| ||||| ||||| ||| |||||||   ||| |  |  ||    |  || ||||||||||| |||||||||||||| |||||||||| ||| ||  ||  | || |||||||||||| |||||||||  || ||| | || || ||||||||||||||| | || |||||  ||||||||||||||||||| || ||||||||||| ||||||| ||| || ||||||| | |||||||||||||| |  ||||| |  | |  || | | |||||||||||| | ||||| ||||| ||| | || || |||||||| ||||||||| |||||||| | |||||||| || ||||||||||| || ||| ||| |||||| ||||| |||||||| ||   | | ||    ||| || | ||||||   ||  ||| |||||| |||| ||| ||||| | | ||||||| ||||| || ||||||||  ||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||   | ||||| || |   |||||| |  ||| || ||  | ||||  || ||||| |   | ||||||| ||||| | |||||| |||| || ||||| ||||||  ||| || ||| | |||||||| ||||| ||||| |||||| |||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| || || | | | ||| | | ||||||  |||||||
Sbjct:      111 CGTGCTGATACTCCGGCCGCCATTCTCGCCATCGGCACGGCCAATCCGG-CCA-ATTTTGTGACCCAAGCTAATTATCCCGATTACTACTTCAACGTCACCAAAAGCCAACACATGACTAACCTCAAAAATAAGTTTCAACATATATGTAATAACACGACAATAAGAAAACGTTACACACACTTAGATGAAGAGTATTTGAAGCAAAACCCAAACAT-GTGTGAGTAC---ATGGCACCATCCCTAAATGCACGTCAATCCATGTTGGTCACAGAGGTTCCCAAGCTTGGAAAAGAAGCT-G-CCATGAAGGCCATCAAAGAATGGGGACAACCCAACAAATCTAAGATCACACATCTAATCTTTTGCACCA-TG--TCCGGTATCGATATGCCCGGTGCCGACTACCATTGCGCAAAGCTTCTCGAACTCGA-ACCAACCGTAAAGCGTGTGATGTTGTATCAACACGGTTGTCACGGCGGCGGAACCGTTCTACGCCTCGCAAAGGATTTAGCAGAGAATAACAAAGGTGCTCGAGTTCTCGCTGTGTGTTCTGATATCATGGCTTTCATGTTTCGTGGGCCTACTAAGTCTCATTTAG-CTTCCATGGTGGGACAAGCTTTGTTTGGAGATGGAGCTTCAGCAGTTATTGTTGGTGCTGAACCCAATGAGTCAATGGGGGAAAGACCCATATTTGAGTTAGTATCAGCTGCGCAAACGATCTTGCCAAACTCAGACAAAGCCATCATTGGAAATGTTAGGGAAATGGGGTTGACATTTGACTTACGTAAAGATGTTCATTTGTTGATTTCTAACAACATTGAGAAGAGTTTGATGGAGGCATTCACTCCAATTGGGATTAGTGATTGGAACTCCTTATTTTGGATTACACATCCAGGTGGACCAACTATTCTGAATGCAGTGGAAGCTGAACTT-CAGTTGAAGAAAGAGAAGTT-GGAAATTTCACGTTATGTGTTAAGTGAGTATGGAAACATGTCGAGCTCATGTGTGTTTTTTATAATGGATGAATTGAGAAAGAGATCGTTGAAGGAAGGGAAATCCACCACTGGGGATGGGTTTGAGTGGGGTGTTCTTTTTGGGTTTGGCCCTGGCTTGACAGTTGAGACACTAGTCTTACATAGTGTGGCCATCAA 1252


Match Name	Summary
XM_030628326.1	E-Value: 0.000e+0, PID: 98.36 Description: PREDICTED: Cannabis sativa polyketide synthase 4-like (LOC115700696), mRNA [more]
XM_030626629.1	E-Value: 0.000e+0, PID: 98.36 Description: PREDICTED: Cannabis sativa polyketide synthase 4-like (LOC115699293), mRNA [more]
XM_030626628.1	E-Value: 1.208e-178, PID: 76.92 Description: PREDICTED: Cannabis sativa phloroisovalerophenone synthase (LOC115699292), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001099	Chalcone/stilbene synthase, N-terminal	PFAM	PF00195	Chal_sti_synt_N	coord: 3..221 e-value: 8.3E-101 score: 336.1
IPR012328	Chalcone/stilbene synthase, C-terminal	PFAM	PF02797	Chal_sti_synt_C	coord: 232..382 e-value: 1.4E-63 score: 213.4
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 1..229 e-value: 1.8E-79 score: 268.5
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 230..384 e-value: 9.7E-54 score: 182.8
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 3..225
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 229..381
IPR011141	Polyketide synthase, type III	PIRSF	PIRSF000451	PKS_III	coord: 1..383 e-value: 2.2E-121 score: 401.2
IPR011141	Polyketide synthase, type III	PANTHER	PTHR11877	HYDROXYMETHYLGLUTARYL-COA SYNTHASE	coord: 4..382
None	No IPR available	PANTHER	PTHR11877:SF14	CHALCONE SYNTHASE	coord: 4..382
IPR018088	Chalcone/stilbene synthase, active site	PROSITE	PS00441	CHALCONE_SYNTH	coord: 149..165

Cannabis sativa OLS mRNA for olivetol synthase
complete cds

Reanalysis of 21 trichome RNA-Seq samples, FN-clones109 (TMM50 minvalue)

Reanalysis of 21 trichome RNA-Seq samples, PK-clones109 (TMM50 minvalue)

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCAC CGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATT TTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGA AAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGA AGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTC TGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAG GATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAAT CACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAG ACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTG ATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGC CAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTT GTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAA TTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGT TGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGG TGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGA CATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTAT GTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTA TTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGG AAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAA GTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCT CAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAA GGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTT TGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCA AATATTAA
Sequence Length	1158
Sequence Checksum	30eab3dc8a5f760d50d8bdfbb829c20c

Sequence

ATGAATCATCTTCGTGCTGAGGGTCCGGCCTCCGTTCTCGCCATTGGCAC
CGCCAATCCGGAGAACATTTTATTACAAGATGAGTTTCCTGACTACTATT
TTCGCGTCACCAAAAGTGAACACATGACTCAACTCAAAGAAAAGTTTCGA
AAAATATGTGACAAAAGTATGATAAGGAAACGTAACTGTTTCTTAAATGA
AGAACACCTAAAGCAAAACCCAAGATTGGTGGAGCACGAGATGCAAACTC
TGGATGCACGTCAAGACATGTTGGTAGTTGAGGTTCCAAAACTTGGGAAG
GATGCTTGTGCAAAGGCCATCAAAGAATGGGGTCAACCCAAGTCTAAAAT
CACTCATTTAATCTTCACTAGCGCATCAACCACTGACATGCCCGGTGCAG
ACTACCATTGCGCTAAGCTTCTCGGACTGAGTCCCTCAGTGAAGCGTGTG
ATGATGTATCAACTAGGCTGTTATGGTGGTGGAACCGTTCTACGCATTGC
CAAGGACATAGCAGAGAATAACAAAGGCGCACGAGTTCTCGCCGTGTGTT
GTGACATAATGGCTTGCTTGTTTCGTGGGCCTTCAGAGTCTGACCTCGAA
TTACTAGTGGGACAAGCTATCTTTGGTGATGGGGCTGCTGCGGTGATTGT
TGGAGCTGAACCCGATGAGTCAGTTGGGGAAAGGCCGATATTTGAGTTGG
TGTCAACTGGGCAAACAATCTTACCAAACTCGGAAGGAACTATTGGGGGA
CATATAAGGGAAGCAGGACTGATATTTGATTTACATAAGGATGTGCCTAT
GTTGATCTCTAATAATATTGAGAAATGTTTGATTGAGGCATTTACTCCTA
TTGGGATTAGTGATTGGAACTCCATATTTTGGATTACACACCCAGGTGGG
AAAGCTATTTTGGACAAAGTGGAGGAGAAGTTGCATCTAAAGAGTGATAA
GTTTGTGGATTCACGTCATGTGCTGAGTGAGCATGGGAATATGTCTAGCT
CAACTGTCTTGTTTGTTATGGATGAGTTGAGGAAGAGGTCGTTGGAGGAA
GGGAAGTCTACCACTGGAGATGGATTTGAGTGGGGTGTTCTTTTTGGGTT
TGGACCAGGTTTGACTGTCGAAAGAGTGGTCGTGCGTAGTGTTCCCATCA
AATATTAA

Sequence Length

1158

Sequence Checksum

30eab3dc8a5f760d50d8bdfbb829c20c

Summary

Resource Type	mRNA
Accession	AB164375.1
Organism	Cannabis sativa L.
Name	AB164375.1
Identifier	AB164375.1
Time Accessioned	Thursday, November 21, 2024 - 09:39
Time Last Modified	Thursday, November 21, 2024 - 09:39