MN967475.1

Annotations
This record has the following annotations.
TermNameDefinition
GO:0000287magnesium ion bindingInteracting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829lyase activity
GO:0010333terpene synthase activityCatalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR005630Terpene_synthase_metal-bd
INTERPRO:IPR036965Terpene_synth_N_sf
INTERPRO:IPR001906Terpene_synth_N
INTERPRO:IPR008949Isoprenoid_synthase_dom_sf

Click a tab below to view blast alignments.

IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..95
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 28..548
NoneNo IPR availablePANTHERPTHR31225:SF99coord: 28..548
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 243..550
e-value: 2.6E-117
score: 393.2
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 232..545
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 26..183
e-value: 7.8E-36
score: 123.6
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 25..242
e-value: 1.3E-42
score: 147.6
IPR005630Terpene synthase, metal-binding domainPFAMPF03936Terpene_synth_Ccoord: 235..496
e-value: 1.6E-81
score: 273.6
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 18..218

  • Cannabis sativa cultivar Lemon Skunk terpene synthase 35 mRNA
  • complete cds
Sequences
Sequence
ATGGCTTCTCCCTTTCTTTATGTCCCTTCTAAACACGGCAATGGATTACA
AAGTTTCACAGATCCGTTTTACATGGAGTATACACGTAATATACGAGAGA
TGAAGAACGTAATGAACAGTATTATTTTGGCTGATGATGATTATCGTGAA
CGCTCCATAGAAGCTTTGAACTTGGTCAACGCTGTGCTTAGAGTCGGCAT
TGATTATCATGTCCAAGATGAGATTAAATCTATCCTTGAAAGGGAACATA
TAATTTTCAGTGACCATATTAGTAACCAATATTTTAATAATATTAATCAA
GACCACCTGTATGAGGTTTCTCTTCGTTTCCGATTACTGAGACAAGGAGG
TTATGATGTCTCTCCAGATGTGTTTAACGAGTTGATGAAGGACAAAAAGG
GAAATTTCAATGTTTTAGTGGAAGAAGACAGAGAGGGACTAAGAGAATTG
TTTGAAGCCTCACAAGTAAGAATAGAAGGAGAAGAGGTACTAGAGGAAGC
TGAAGTGTTTAGTGGCGAACACCTAAAAGAATGGGCAAATCTTCATCGTC
ATACGAGTGAAGCTCGAAGTATTCAATTAACGTTAGACCAACCTTGTCAT
AAAAGCTTGGCCAGGGTCACATCTCCAAACTTTTTGGACAGTTTCTCAGC
CAACACTGCTACCAGAGACCAAGGCTGGACCTGGATGACCCTTTTAAACA
AACTGGTCACAATGGACTTCAAAATAGTTCAGTCTATTCACCAAAGGGAA
ATTGTTCAAGTCTCCAAATGGTGGAAAGAGCTTGGTTTGGCAGAGGAGTT
GAAATTTGCTAGAGACCAACCCCTAAAATGGTACCTCTGGACAGTGGCAA
GTCTACCAGATCCAAGCTTGTCTGAAGAGAGGATTGAACTAACTAAACCC
ATTTCTCTCGTCTACATAATAGATGATATTTTTGATGTTTATGGGACACT
AGACGAACTCACTCTTTTCACAGACGCAGTTAATAATTGGGAAATTAAAG
AGCAGTTACCCGACTATTTGAAGATATGTTTCAAGGCACTTGATGATATA
ACCAACAAAATTAGCTACGTGGTGTACAGAAAACATGGATGGAACCCAAT
TGACTCCTTAAGAAAATCGTGGGGAAAACTGTGCAATGCGTTCTTGTTAG
AAGCAGAGTGGTTTGGTTGTGGGAAGTTGCCAAATGAAGAGGTGTATTTG
AAGAACGCGATTGTGAGTTCTGGTGTACACGTGGTGCTAGTTCATATGTT
CTTTCTCTTAGGTGAAGGTATATCCATGGAAGCTGTAAACTTACTGGACA
ACATTCCAGGCCTTGTGTCTTCTACAGCAGCAATTCTTCGTCTTTGGGAT
GACTTAGGAAGTGCCAAGGATGAGAATCAAAATGGGCATGATGGGTCTTA
CGTTGAGTGCTACATGAAAAGACACAAGGAGTGTTCAATGGGCGAAGCAA
GGGAGCAAGTGATTCGTATGATTAAAAATGAGTGGGAACGCCTCAATAAG
GAGTGTTTCTCGCCAAAACATTTTCCCATGTGCTTCAGAAAGGGTTGTCT
TAATGCTGCTAGGATGGTTCCAGTGATGTATGACTATGATGATCATCATC
GCCTTCCAGGCCTCCAGAATTATATCAACTCACTTCTCTCTCATCAAACA
ATATAA
Sequence Length
1656
Sequence Checksum
6868de7dfeb855a49d7233180a8c6a22
Summary
Resource Type
mRNA
Accession
MN967475.1
Organism
Name
MN967475.1
Identifier
MN967475.1
Time Accessioned
Friday, October 21, 2022 - 15:31
Time Last Modified
Friday, October 21, 2022 - 15:31