MN967473.1 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of MN967473.1 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 686.227 bits (371), Expect = 0.000e+0
Identity = 381/386 (98.70%), Postives = 381/386 (98.70%), Query Frame = 1

Query:      397 GATATTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTCAGAATGGGTACATAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCCCTGCATAGAATGGAAATTGATAAAGTCACCAG 782
                |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10520642 GATATTTTCAACAAGTACAAGGACAATAATAACGGTTGTTTCGACACGAGGCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATTTGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTGAGAATGGGTACATAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCCCTGCATAGAATGGAAATTGATCAAGTCACCAG 10520257

HSP 2 Score: 503.409 bits (272), Expect = 4.196e-140
Identity = 274/275 (99.64%), Postives = 274/275 (99.64%), Query Frame = 1

Query:     1391 AGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1665
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10518322 AGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAATAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 10518048

HSP 3 Score: 470.169 bits (254), Expect = 4.256e-130
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1

Query:     1140 GTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGG 1393
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10519457 GTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGG 10519204

HSP 4 Score: 435.083 bits (235), Expect = 1.552e-119
Identity = 247/252 (98.02%), Postives = 247/252 (98.02%), Query Frame = 1

Query:      146 AGGATTTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTG 397
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 10521319 AGGATTTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAACATGATCATCATCATCA---AGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCTCTTCGTTCCTGCTG 10521071

HSP 5 Score: 398.15 bits (215), Expect = 2.037e-108
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1

Query:      784 TGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGACATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAG 1001
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10520079 TGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAACCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGACATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAG 10519862

HSP 6 Score: 274.424 bits (148), Expect = 3.581e-71
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

Query:        1 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGG 148
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10521638 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGG 10521491

HSP 7 Score: 255.958 bits (138), Expect = 1.297e-65
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 1

Query:     1000 AGCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACG 1140
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10519707 AGCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACGATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACG 10519567


Match Name	Summary
CM010796.2	E-Value: 4.196e-140, PID: 98.70 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of MN967473.1 vs. Genbank
Match Name: PKGMv1-56105_t
Description: No definition line

HSP 1 Score: 1138.66 bits (616), Expect = 0.000e+0
Identity = 620/622 (99.68%), Postives = 620/622 (99.68%), Query Frame = 1

Query:     1044 GACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1665
                |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      522 GACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACGATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAATAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1143

HSP 2 Score: 436.93 bits (236), Expect = 5.693e-121
Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 1

Query:      447 GCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCA 685
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      192 GCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATTTGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCA 430

HSP 3 Score: 320.591 bits (173), Expect = 5.982e-86
Identity = 185/190 (97.37%), Postives = 185/190 (97.37%), Query Frame = 1

Query:      208 ATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTG 397
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct:        1 ATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAACATG---ATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCTCTTCGTTCCTGCTG 187

HSP 4 Score: 165.472 bits (89), Expect = 2.966e-39
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 1

Query:      806 CTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGG 897
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct:      431 CTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAACCTTGTCGAAACAAAGG 522


Match Name	Summary
PKGMv1-56105_t	E-Value: 5.693e-121, PID: 99.68 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

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BLAST of MN967473.1 vs. Genbank
Match Name: NC_044371.1
Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence

HSP 1 Score: 664.068 bits (359), Expect = 0.000e+0
Identity = 377/386 (97.67%), Postives = 377/386 (97.67%), Query Frame = 1

Query:      397 GATATTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTCAGAATGGGTACATAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCCCTGCATAGAATGGAAATTGATAAAGTCACCAG 782
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 93280177 GATATTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTAAGAGAGGACATCAAGGGTTTGGTGAGCTTATATGAAGCCTCCCATCTATGCATGGAGGGGGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACATCTTCATCGTTATGATCAATATCAGGCCAAATTTGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTGAGAATGGGTACATAAATTTGTTTAAACAACTAGCAAAAGTTGAATTTACTAGAGTTCAGTCCCTGCATAGAATGGAAATTGATAAAGTAACCAG 93279792

HSP 2 Score: 508.949 bits (275), Expect = 8.860e-142
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1

Query:     1391 AGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1665
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93272923 AGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 93272649

HSP 3 Score: 453.549 bits (245), Expect = 4.211e-125
Identity = 250/252 (99.21%), Postives = 250/252 (99.21%), Query Frame = 1

Query:      146 AGGATTTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTG 397
                ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93280861 AGGATTTAGATAAATACAGGGACGTTT-AAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAACATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTG 93280611

HSP 4 Score: 433.236 bits (234), Expect = 5.486e-119
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 1

Query:     1140 GTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGA 1376
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93279130 GTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTTCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGA 93278894

HSP 5 Score: 398.15 bits (215), Expect = 2.001e-108
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 1

Query:      781 AGATGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGACATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAG 1001
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93279697 AGATGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTCATAGATGATATTTTCGACATATACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAG 93279477

HSP 6 Score: 274.424 bits (148), Expect = 3.519e-71
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

Query:        1 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGG 148
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93281182 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGG 93281035

HSP 7 Score: 222.718 bits (120), Expect = 1.293e-55
Identity = 134/141 (95.04%), Postives = 134/141 (95.04%), Query Frame = 1

Query:     1000 AGCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACG 1140
                |||||| |||||||||||||  |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 93279380 AGCTGGAAATATAGTGCTATGGAAAAGCTTCCAGACTCCATGAAGACATGCTTTAAAGCCCTAGATAATATGATCAATGAGTCTAGCCATACGATCTATCAAAAGCGTGGATGGAACCCTTTACACTCTCTTCGGAAGACG 93279240


Match Name	Summary
NC_044371.1	E-Value: 8.860e-142, PID: 97.67 Description: Cannabis sativa chromosome 1, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of MN967473.1 vs. Genbank
Match Name: XM_030635402.1
Description: PREDICTED: Cannabis sativa (3S,6E)-nerolidol synthase 1 (LOC115707440), mRNA

HSP 1 Score: 2957.61 bits (1601), Expect = 0.000e+0
Identity = 1644/1665 (98.74%), Postives = 1644/1665 (98.74%), Query Frame = 1

Query:        1 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGGATTTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTGATATTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTAAGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATGCATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCCAAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTCAGAATGGGTACATAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCCCTGCATAGAATGGAAATTGATAAAGTCACCAGATGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGACATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAGCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGCTTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCAAAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1665
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      168 ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACCCTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGAACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGGATTTAGATAAATACAGGGACG-TTTAAGAAAAGCAGACCCATTTGATGAAGGTCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCGAGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTTAGAGAATTCGAACATGATCATCATCATCATCAAGATCTGTATGATGTAGCTCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTGATATTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTAAGAGAGGACATCAAGGGTTTGGTGAGCTTATATGAAGCCTCCCATCTATGCATGGAGGGGGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAACACTTGGAAGCGTCCATGACACATCTTCATCGTTATGATCAATATCAGGCCAAATTTGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAAGTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTGAGAATGGGTACATAAATTTGTTTAAACAACTAGCAAAAGTTGAATTTACTAGAGTTCAGTCCCTGCATAGAATGGAAATTGATAAAGTAACCAGATGGTGGCGAGACATTGGTTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATATTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTTGCGCTTACAAAATCCATTTCGTTTATCTATGTCATAGATGATATTTTCGACATATACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTAGCTGGAAATATAGTGCTATGGAAAAGCTTCCAGACTCCATGAAGACATGCTTTAAAGCCCTAGATAATATGATCAATGAGTCTAGCCATACGATCTATCAAAAGCGTGGATGGAACCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTTTGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTACCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTTCACGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCCAAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACAGCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAATCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAGGAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGATGCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCCACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGATGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATCAAATCTTTGTTATAG 1831


Match Name	Summary
XM_030635402.1	E-Value: 0.000e+0, PID: 98.74 Description: PREDICTED: Cannabis sativa (3S,6E)-nerolidol synthase 1 (LOC115707440), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 24..47
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..23
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..11 score: 0.479
None	No IPR available	PANTHER	PTHR31225:SF99		coord: 48..554
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 48..554
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 60..538 e-value: 2.6E-168 score: 562.5
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 238..545
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 239..503 e-value: 2.6E-86 score: 289.3
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 56..192 e-value: 5.3E-41 score: 140.4
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 61..232 e-value: 2.6E-168 score: 562.5
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 62..230

Cannabis sativa cultivar Chocolope terpene synthase 18 mRNA
complete cds

Reanalysis of 21 trichome RNA-Seq samples, FN-clones109 (TMM50 minvalue)

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACC CTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGA ACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGGAT TTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGG TCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCG AGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTT AGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGC TCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTGATA TTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTA AGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATG CATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAAC ACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCC AAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAA GTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTCAGAATGGGTACA TAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCC CTGCATAGAATGGAAATTGATAAAGTCACCAGATGGTGGCGAGACATTGG TTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATA TTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTT GCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGA CATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTA GCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGC TTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCA AAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTT TGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTA CCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCA CGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCC AAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACA GCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAA TCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAG GAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGAT GCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCC ACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGA TGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATC AAATCTTTGTTATAG
Sequence Length	1665
Sequence Checksum	54345cec6a9e61d8188e548dfd9ffae2

Sequence

ATGGCGTTGTCAATAATGTCTTCTTACGCATCTTTTCGTCCCTTTAAACC
CTCCTCATCACTTTCGAGTTCTCAAAACATAATTAGAAATTTTGACGAGA
ACTCCAAATATCATATCAGGAGTAACGGTGATCTCACACCACAAAAGGAT
TTAGATAAATACAGGGACGTTTTAAGAAAAGCAGACCCATTTGATGAAGG
TCTGAAGATGATTGATGCTATTCAACGGCTAGGAATTGACTATATCTTCG
AGGAAGAGATTGATAAAATTATACAAAGCCAGTCTGCTTATAAGTTTTTT
AGAGAATTCGAGCATGATCATCATCATCATCAAGATCTGTATGATGTAGC
TCTTCGTTTTCGACTCTTGAGACAACACGGTCACTTCGTTCCTGCTGATA
TTTTCAACAAGTACAAGGACAATAATAAGGGTTGTTTCGACACAAGGCTA
AGAGAGGACATCAAGGGTTTGCTGAGCTTATATGAAGCCTCCCATCTATG
CATAGAGGGAGAAAATATCCTTGATGAAGCTGCTTTATTTAGTGCTCAAC
ACTTGGAAGCGTCCATGACACGTCTTCATCGTTATGATCAATATCAGGCC
AAATATGTGGCAACTACACTTCAAAATCCCACTCACAAAAGTTTATCCAA
GTTCACAGCCAAGGACCTTTTTGGTGTCTATCCCAGTCAGAATGGGTACA
TAAATTTGTTTCAACAACTAGCAAAAGTTGAATTTAATAGAGTTCAGTCC
CTGCATAGAATGGAAATTGATAAAGTCACCAGATGGTGGCGAGACATTGG
TTTAGCTAAGGAATTAACTTTCGCAAGAGATCAACCGGTGAAGTGGTATA
TTTGGTCCATGGCCTGCCTAACCGATCCAATCTTGTCGAAACAAAGGGTT
GCGCTTACAAAATCCATTTCGTTTATCTATGTAATAGATGATATTTTCGA
CATGTACAGTTCACTTGATGAACTCATTCTCTTCACCCAGGCTGTCTCTA
GCTGGGAATATAGTGCTATACAAAAACTTCCAGACTCCATGAAGACATGC
TTTAGAGCCCTAGATAATATGATCAATGAGTCTAGCCATACTATCTATCA
AAAGCGTGGATGGAGCCCTTTACACTCTCTTCGGAAGACGTGGGCAAGTT
TGTGCGAAGCCTTTTTAGTAGAGGCAAAATGGTTTGCATCAAGGCACGTA
CCAAAGGCAAAAGAATACTTGGAAAATGGTGTGGTCAGCTCAGGAGTGCA
CGTAGTTCTGGTTCATATATTTGTTCTCTTGGATGAAACCAGTCTCACCC
AAAAGACACTGGATTTTGTGGAAAACATGCCTTCCATCATTACTTCTACA
GCATCGATTCTTAGGCTTTGGGATGACTTTGGTAGTGCCAAGGATGAGAA
TCAAGAAGGACATGACGGATCTTATGTGGAGTGTTACATGAAGGAATTAG
GAGGCAGTGTTGAAGATGCACGTGAGGAAATGATGGAAAAGATTTCAGAT
GCATGGAAGTGCCTCAACAAAGAATGCATACTTCGAAATCCAGCGTTTCC
ACCACCATTCCTCAAAGCTTCTCTCAATCTCGCAAGATTAGTTCCTTTGA
TGTATAATTATGATCACAACCAACGCCTACCCCACTTGGAAGAACATATC
AAATCTTTGTTATAG

Sequence Length

1665

Sequence Checksum

54345cec6a9e61d8188e548dfd9ffae2

Summary

Resource Type	mRNA
Accession	MN967473.1
Organism	Cannabis sativa L.
Name	MN967473.1
Identifier	MN967473.1
Time Accessioned	Tuesday, November 4, 2025 - 02:16
Time Last Modified	Tuesday, November 4, 2025 - 02:16