TPS12

Annotations
This record has the following annotations.
TermNameDefinition
GO:0000287magnesium ion bindingInteracting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829lyase activity
GO:0010333terpene synthase activityCatalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965Terpene_synth_N_sf
INTERPRO:IPR008949Isoprenoid_synthase_dom_sf
INTERPRO:IPR005630Terpene_synthase_metal-bd
INTERPRO:IPR001906Terpene_synth_N

Click a tab below to view blast alignments.

IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 42..610
NoneNo IPR availablePANTHERPTHR31225:SF74TRICYCLENE SYNTHASE, CHLOROPLASTICcoord: 42..610
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 64..229
e-value: 1.4E-40
score: 139.0
IPR005630Terpene synthase, metal-binding domainPFAMPF03936Terpene_synth_Ccoord: 287..553
e-value: 8.4E-94
score: 313.8
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 63..594
e-value: 2.3E-183
score: 612.2
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 282..607
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 102..281
e-value: 2.3E-183
score: 612.2
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 61..281

TPS12
Sequences
Sequence
TTGGGAGTTCATCAATTTTCTCCACTTTCATTAATCCTTAATACTACAAA
ATTAGCAAGAGCAAGTACATTATCAAGTGCTTGCTACCCCATCCAATGTA
CTATGGTCAATAGTACAAATATTACTAATAATACTACTATATTTGATAAT
CATATTCATAGAAGATCAGCCAATTATGAACCTCCCATTTGGTCTTTTGA
TTACATTCAATCTCTTTCATCAAGCCAATATAAGGGAGAAACATGTACAA
GTAGATTGAATGAGCTAGAGGCAAATGTGAAAGAGATATTGTTAGTTGAG
ATGAAATCTAACTCTTTAGCTCAACTTGAGTTTATTGATGCATTGCAAAG
ACTTGGATTATCTTACCGTTTCGAGACTGAAATAAACACTATTTTAAATG
AAAAGTACTCCGGTAATATTATCGATAACCCTAATTATAATTTGTACGCC
ACAGCTCTCGAATTCAGGCTTCTACGCCATCATGGTTATGATGTATCTCA
AGAAATTTTCAATGTGTTTAAGGATGAGATTACAAGCAAGTTCAAGGCAA
GAACGAGTGGCGAAGATATAATTGGAGTATTGGCTTTATACGAAGCTTCA
TTCTATGGCAAAAAAAGTGAAAGTATTTTGGAAGAAGCTAGGGTTTCCTC
AATCGAATGTCTCGAAAATTACGTAGCAACTATGACGATGGAGCGAAACA
AACCATCATTATTAGTCAATGATTATGATGATGATAATAATATGTTATTA
TTAGTGAATCATGCCTTGGAGCTTCCACTTTATTGGAGAATAACAAGATC
AGAAGCAAGGTGGTTCATTGATTTATATGAAAAAAATCATAACATGAATT
CTACTTTGCTTGAATTTGCCAAATTGGATTACAACATGGTACAATCCATA
TATCAAGAAGATCTAAAACATCTCTCAAGGTGGTGGAGCCATACAAAACT
TGGAGAGAAAATGGATTTCTTTAGAGATAGATTAATGGAGTGTTTCTTAT
GGACTGTGGGAATAGCATGTGAGCCAGAAAAAAGCTATTATAGAAGAATG
TCTGGAAGATTATATGTTCTAATAACAACAATTGATGATATATATGATGT
TTATGGAACATTGGAGGAATTAGAGCTTTTCACTAATGCAGTTGAGAGAT
GGGATGTGAAAGCAATGGATGATTTACCAGAATATATGAGGATGCCTTTC
TTTCTTTTACACAATACCATAAACGAAATGGCTTTCGATGTGTTAGGACA
CCAAAATTTCCTCAACGTTAAATTCCTTAAGAGGACGTGGGTAGATTTCT
GTAAACATCAATTACAAGAGGCAAAATGGTTTCACAGTGGATACAAACCA
ACATTCGAAGAATACATTAACAATGCATGGATTTCGGTATCAGGACCGAT
TATTCTTATGGATGCTTATTTCTCTCTTACAAATCCTGTTACAAAAGATG
CCATAAATTTACTGGAATTAGGTTATCCACCCATAATTTACCATGCATCC
ATGATTCTACGACTTACAGATGATCTAGGAACATCGAATGATGAAATGAA
AAGAGGTGATATTCCGAAATCAATTCAATGTTACATGAACGATACAGGTG
TTTCTGAAGATGAAGCTCGAGATCATATGAAGTTTCTAATAAGTGAATTA
TGGAAGGAAATAAATAATGAAGATGAAAATATGGACTCTCCTTTCTCAAA
ACAATTTCTTCAAAATTGTAAAAATCTTGCTAGAATATCACAATTTATAT
ATCAATATGGAGATGGACATGCTTCTCAGGATAGTTTATCAAAACAAAGA
ATTTCAGAATTGATAATTAATCATATTCCTTCT
Sequence Length
1833
Sequence Checksum
fd205f59de41350bea416d0ffe6f7eee
Summary
Resource Type
mRNA
Organism
Name
TPS12
Identifier
TPS12
Time Accessioned
Friday, October 21, 2022 - 20:15
Time Last Modified
Friday, October 21, 2022 - 20:15