TPS46 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS46 vs. Genbank
Match Name: AGQN03002754.1
Description: Cannabis sativa cultivar Purple Kush 002758F, whole genome shotgun sequence

HSP 1 Score: 449.856 bits (243), Expect = 4.406e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:      775 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct:    67583 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACCTACAAAGTTATGAG 67338

HSP 2 Score: 418.463 bits (226), Expect = 1.242e-114
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    68535 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 68310

HSP 3 Score: 377.837 bits (204), Expect = 2.109e-102
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query:        1 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    70602 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 70399

HSP 4 Score: 287.351 bits (155), Expect = 3.655e-75
Identity = 161/164 (98.17%), Postives = 161/164 (98.17%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGACGACGATGATGAT 1182
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct:    67180 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAATGATGATGATGATGAT 67017

HSP 5 Score: 283.658 bits (153), Expect = 4.729e-74
Identity = 203/227 (89.43%), Postives = 203/227 (89.43%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAAC-TTTACTAAGGCAATTCAAAGGT 643
                |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||  || |||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| ||  ||||||| |||||| ||||| |||||||||||  |||||||||
Sbjct:    42506 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAG-AAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATCACTGAGTTA-AAAACTTTTACTAAGGCCTTTCAAAGGT 42730

HSP 6 Score: 267.038 bits (144), Expect = 4.762e-69
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1

Query:     1180 GATGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 1329
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    66986 GATGTTAGGGTTTTGCACCTTTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCAAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 66837

HSP 7 Score: 246.725 bits (133), Expect = 6.204e-63
Identity = 241/293 (82.25%), Postives = 241/293 (82.25%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAAC--GA-CGA-CGAT--GATGATGT-TAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                |||| |||||| | || || ||||||||||||||||| |||||| ||||||||||| | ||||||||||| ||||||||| |  | |||||| |||||||| |||| || ||||||||||| ||||| || |||||| |||||||   |   | | | |  |   | || || |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||| ||||||| || ||| ||||||| |||||| ||||||||||
Sbjct:    43487 AGAAGGAAAAAGAAGAAGGAAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGAGATGGAAGAAGCAGTAAAATACGTGAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATTGATGGCTTTACCAATCTTTCAAAAGA-GTGTAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGAAGACATTAGCAAAGCAATCTATGTTCCTTTGAA 43778

HSP 8 Score: 244.878 bits (132), Expect = 2.231e-62
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCTTAAGAGAAATA 774
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct:    68190 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCCTAAGAGAAATA 68056

HSP 9 Score: 230.105 bits (124), Expect = 6.248e-58
Identity = 192/226 (84.96%), Postives = 192/226 (84.96%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||| || ||| ||  ||| |||||||||||||||||||
Sbjct:    32015 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 32240

HSP 10 Score: 222.718 bits (120), Expect = 1.046e-55
Identity = 130/134 (97.01%), Postives = 130/134 (97.01%), Query Frame = 1

Query:      191 TATTTCATA-ATCT-GATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGT 322
                ||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    69253 TATTT-ATATATGTAGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGT 69121

HSP 11 Score: 195.019 bits (105), Expect = 2.279e-47
Identity = 207/256 (80.86%), Postives = 207/256 (80.86%), Query Frame = 1

Query:      772 ATA-TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAA-AGC--CAAGCTTAAAAATAT-C-C-CAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                ||| ||||||||||| |||  ||||||||||||||||||  | |||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |    |||  |||    | | | | ||||||| | |||   | | ||  |  ||||| ||| | || |||| |||||||||| |||| |||||| ||||||||||||||
Sbjct:    43056 ATAGTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATTCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAG 43311

HSP 12 Score: 191.325 bits (103), Expect = 2.948e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

Query:      319 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 421
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    68718 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 68616

HSP 13 Score: 154.392 bits (83), Expect = 3.868e-35
Identity = 99/106 (93.40%), Postives = 99/106 (93.40%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAAT---TATGTACCTTGATCAACAAGAAA 742
                ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||
Sbjct:    54716 AGGTGGGATGGTGAAGGGTTGTGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCATGTAAAGGAAATGGCAATCACTATGTACCTTGATCAACAAGAAA 54821

HSP 14 Score: 152.546 bits (82), Expect = 1.391e-34
Identity = 96/103 (93.20%), Postives = 96/103 (93.20%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAA 742
                |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||||||
Sbjct:    42813 AGGTGGGATGGTAAAGAATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAA 42915

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BLAST of TPS46 vs. Genbank
Match Name: AGQN03001208.1
Description: Cannabis sativa cultivar Purple Kush 001208F, whole genome shotgun sequence

HSP 1 Score: 385.223 bits (208), Expect = 1.260e-104
Identity = 220/226 (97.35%), Postives = 220/226 (97.35%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct:   153976 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAGGGTGCTATAATAATAACGGTTGCAGATGATTTTTTTGATATGAAAGATTCCTTAATCACTGAGTTAGAAACCTTTACTAAGGCAATTCAAAGGT 153751

HSP 2 Score: 377.837 bits (204), Expect = 2.109e-102
Identity = 232/246 (94.31%), Postives = 232/246 (94.31%), Query Frame = 1

Query:      775 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct:   153053 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAGTGGAGTAAAAATGGAATTATACCAACCATGGATGAATATCTTAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCCTCATATTTTCTAAAACCAAGCTTAAAAATATCACAATTACAATCGACAGAGTATGATATTGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACCTACAAAGTTATGAG 152808

HSP 3 Score: 377.837 bits (204), Expect = 2.109e-102
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1

Query:        1 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   156697 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 156494

HSP 4 Score: 291.044 bits (157), Expect = 2.826e-76
Identity = 204/227 (89.87%), Postives = 204/227 (89.87%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAAC-TTTACTAAGGCAATTCAAAGGT 643
                |||||||||||| |||||||||||| |||||||||||||||||||||||||||||  || |||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| ||  ||||||| |||||| ||||| |||||||||||  |||||||||
Sbjct:   140725 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATCACTGAGTTA-AAAACTTTTACTAAGGCCTTTCAAAGGT 140950

HSP 5 Score: 278.118 bits (150), Expect = 2.200e-72
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1

Query:     1180 GATGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 1329
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   152474 GATGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 152325

HSP 6 Score: 261.498 bits (141), Expect = 2.216e-67
Identity = 157/165 (95.15%), Postives = 157/165 (95.15%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGACGACGATGATGATG 1183
                ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct:   152665 AGAAAGAAAAGGATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCAAGGTAGAGATTGAAGAAGCAATTGAGTACTTGCAAGAGGTACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGGCGACGATGATGATG 152501

HSP 7 Score: 246.725 bits (133), Expect = 6.204e-63
Identity = 241/293 (82.25%), Postives = 241/293 (82.25%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAAC--GA-CGA-CGAT--GATGATGT-TAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                |||| |||||| | || |||||||||||||||||||| |||||| ||||||||||| | |||||||| || ||||||||| |  |||||||| |||||||| |||| || ||||||||||| ||||| || |||||| |||||||   |   | | | |  |   | || || ||||  | | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||| ||||||| || ||| ||||||| |||||| ||||||||||
Sbjct:   141735 AGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGAAATGGAAGAAGCAGTAAAGTACGTGAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATTGATGGCTTTACCAATCTTTCAAAAGA-GTGTAGGCATCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGAAGACATTAGCAAAGCAATCTATGTTCCTTTGAA 142026

HSP 8 Score: 228.258 bits (123), Expect = 2.247e-57
Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCTTAAGAGAAATA 774
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct:   153642 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTACATAATTTTGTGAAGGAAATGGCAATTATTTACCTTGATCAACAAGAAACAAGTGACATAACAAATTTCTTAAGAGAAATA 153508

HSP 9 Score: 224.565 bits (121), Expect = 2.907e-56
Identity = 133/138 (96.38%), Postives = 133/138 (96.38%), Query Frame = 1

Query:      191 TATTTCATA-ATCT-GATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGT-TGT 325
                ||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:   154746 TATTT-ATATATGTAGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGTATGT 154610

HSP 10 Score: 206.098 bits (111), Expect = 1.053e-50
Identity = 209/256 (81.64%), Postives = 209/256 (81.64%), Query Frame = 1

Query:      772 ATA-TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAA-AGC--CAAGCTTAAAAATAT-C-C-CAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                ||| ||||||||||| |||  ||||||||||||||||||  | |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |    |||  |||    | | | | ||||||| | |||   | | ||  |  ||||| ||| | || |||| ||||||||||||||| |||||| ||||||||||||||
Sbjct:   141275 ATAGTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTTAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATTCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTTTGTTAAATGACTTACAAAGTTATGAG 141530

HSP 11 Score: 191.325 bits (103), Expect = 2.948e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

Query:      319 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 421
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   154201 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 154099

HSP 12 Score: 147.006 bits (79), Expect = 6.473e-33
Identity = 95/103 (92.23%), Postives = 95/103 (92.23%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAA 742
                |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||||||
Sbjct:   141032 AGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAA 141134

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BLAST of TPS46 vs. Genbank
Match Name: AGQN03005138.1
Description: Cannabis sativa cultivar Purple Kush 005142F, whole genome shotgun sequence

HSP 1 Score: 224.565 bits (121), Expect = 2.907e-56
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||  ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||| || ||| ||  ||| |||||||||||||||||||
Sbjct:    28710 AGGTGGTCTAAAGAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTAATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 28485


Match Name	Summary
AGQN03002754.1	E-Value: 4.406e-124, PID: 99.59 Description: Cannabis sativa cultivar Purple Kush 002758F, whole genome shotgun sequence [more]
AGQN03001208.1	E-Value: 1.260e-104, PID: 97.35 Description: Cannabis sativa cultivar Purple Kush 001208F, whole genome shotgun sequence [more]
AGQN03005138.1	E-Value: 2.907e-56, PID: 84.51 Description: Cannabis sativa cultivar Purple Kush 005142F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table


Match Name	Summary
There are no matches against Genbank for this mRNA.

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of TPS46 vs. Genbank
Match Name: NC_044378.1
Description: Cannabis sativa chromosome 7, cs10, whole genome shotgun sequence

HSP 1 Score: 449.856 bits (243), Expect = 4.328e-124
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 1

Query:      775 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct:   568277 TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGATATACAAAGTTATGAG 568032

HSP 2 Score: 374.144 bits (202), Expect = 2.680e-101
Identity = 218/226 (96.46%), Postives = 218/226 (96.46%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct:   569201 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAGAAAAGTACATACTGTTATTTTGCAGTAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCAACGAGTTAGAAAACTTTACTAAGGCAATTGAAAGGT 568976

HSP 3 Score: 361.217 bits (195), Expect = 2.086e-97
Identity = 201/204 (98.53%), Postives = 201/204 (98.53%), Query Frame = 1

Query:        1 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 204
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct:   571334 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATTTTGCTTTTCAAGATGAATTTGAGCTTGATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTTAATGGAAGAAAATGGAGATCACATATTTCATAATCTG 571131

HSP 4 Score: 289.198 bits (156), Expect = 9.985e-76
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGACGACGATGATGATG 1183
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct:   567874 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAATGATGATGATGATGATG 567710

HSP 5 Score: 285.504 bits (154), Expect = 1.292e-74
Identity = 203/227 (89.43%), Postives = 203/227 (89.43%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAAC-TTTACTAAGGCAATTCAAAGGT 643
                |||||||||||| |||||||||||| |||||||||||||||||||||||||||||  || |||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| ||  |||| || |||||| ||||| |||||||||||  |||||||||
Sbjct:   544459 AGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATTACTGAGTTA-AAAACTTTTACTAAGGCCTTTCAAAGGT 544684

HSP 6 Score: 267.038 bits (144), Expect = 4.679e-69
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1

Query:     1180 GATGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 1329
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   567671 GATGTTAGGGTTTTGCACCTTTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCAAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 567522

HSP 7 Score: 246.725 bits (133), Expect = 6.095e-63
Identity = 241/293 (82.25%), Postives = 241/293 (82.25%), Query Frame = 1

Query:     1019 AGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAAC--GA-CGA-CGAT--GATGATGT-TAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                |||| |||||| | || |||||||||||||||||||| |||||| ||||||||||| | |||||||| || ||||||||| |  |||||||  |||||||| |||| || ||||||||||| ||||| || |||||| |||||||   |   | | | |  |   | || || |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||| ||||||| || ||| ||||||| |||||| ||||||||||
Sbjct:   545479 AGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGAAATGGAAGAAGCAGTAAAGTACGTAAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATTGATGGCTTTACCAATCTTTCAAAAGA-GTGTAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGACGACATTAGCAAAGCAATCTATGTTCCTTTGAA 545770

HSP 8 Score: 233.798 bits (126), Expect = 4.745e-59
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCTTAAGAGAAATA 774
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct:   568874 AGGTGGGATGGTGAGGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTGTGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCCTAAGAGAAATA 568740

HSP 9 Score: 224.565 bits (121), Expect = 2.856e-56
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 1

Query:      418 AGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGT 643
                ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||| || ||| ||  ||| |||||||||||||||||||
Sbjct:   523361 AGGTGGTCTAAAAAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGT 523586

HSP 10 Score: 220.872 bits (119), Expect = 3.694e-55
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1

Query:      204 GATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGT-TGT 325
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:   569960 GATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGTATGT 569838

HSP 11 Score: 200.558 bits (108), Expect = 4.813e-49
Identity = 208/256 (81.25%), Postives = 208/256 (81.25%), Query Frame = 1

Query:      772 ATA-TGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAA-AG--CCAAGCTTAAAAATAT-C-C-CAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAG 1020
                ||| ||||||||||| |||  ||||||||||||||||||  | |||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |   ||||  |||    | | | | ||||||| | |||   | | ||  |  ||||| ||| | || |||| |||||||||| |||| |||||| ||||||||||||||
Sbjct:   545012 ATAGTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAG 545267

HSP 12 Score: 191.325 bits (103), Expect = 2.897e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

Query:      319 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 421
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   569424 AGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGT 569322

HSP 13 Score: 154.392 bits (83), Expect = 3.800e-35
Identity = 99/106 (93.40%), Postives = 99/106 (93.40%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAAT---TATGTACCTTGATCAACAAGAAA 742
                ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||
Sbjct:   554917 AGGTGGGATGGTGAAGGGTTGTGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCATGTAAAGGAAATGGCAATCACTATGTACCTTGATCAACAAGAAA 555022

HSP 14 Score: 147.006 bits (79), Expect = 6.359e-33
Identity = 95/103 (92.23%), Postives = 95/103 (92.23%), Query Frame = 1

Query:      640 AGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAA 742
                |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||||||
Sbjct:   544767 AGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAA 544869


Match Name	Summary
NC_044378.1	E-Value: 4.328e-124, PID: 99.59 Description: Cannabis sativa chromosome 7, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of TPS46 vs. Genbank
Match Name: XM_030624716.1
Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase-like (LOC115697634), mRNA

HSP 1 Score: 2085.99 bits (1129), Expect = 0.000e+0
Identity = 1165/1183 (98.48%), Postives = 1165/1183 (98.48%), Query Frame = 1

Query:        1 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGACGACGATGATGATG 1183
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct:      991 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATTTTGCTTTTCAAGATGAATTTGAGCTTGATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTTAATGGAAGAAAATGGAGATCACATATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTTGGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAGAAAAGTACATACTGTTATTTTGCAGTAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCAACGAGTTAGAAAACTTTACTAAGGCAATTGAAAGGTGGGATGGTGAGGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTGTGTACCTTGATCAACAAGAAACAAGTGACATCACAAATTTCCTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGATATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAATGATGATGATGATGATG 2173

HSP 2 Score: 267.038 bits (144), Expect = 3.491e-70
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1

Query:     1180 GATGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 1329
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     2212 GATGTTAGGGTTTTGCACCTTTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCAAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAAGTTAGATGGATTAGCATCTAATAAA 2361

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BLAST of TPS46 vs. Genbank
Match Name: XM_030623146.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X1, mRNA

HSP 1 Score: 1068.48 bits (578), Expect = 0.000e+0
Identity = 1077/1318 (81.71%), Postives = 1077/1318 (81.71%), Query Frame = 1

Query:       16 GAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGAT-CACAT--ATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAA--AAAC-C-AT-GT-TCTATGGCTTGGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAAC-TTTACTAAGGCAATTCAAAGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGA-CATCACA-AAT---TT-CTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAA-AG--CCAAGCTTAAAAATAT-C-C-CAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACG--ACGA--CGATGAT--GA-TGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                ||||| || ||||||||||| ||  ||||||  |||| ||||||  ||| | |||| |||||||||| ||| || |||||||||||||| | ||||||||||||| |||||  |||||  ||||| |||||||||||| | || | |||||   | | || |  | || || || ||   ||| | || ||||||||| |||| || ||||||||||||||||| ||| | || ||| | ||||||||  |||  || ||| |||||||  || | | ||  | | ||||| | ||||||| |  ||| | ||||||||  ||  |||| || |||||| || |||||||||||| |||||||||  | |||||||||||||| | |||| | ||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  || |||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||  | |||||||||||||||||||||||||| ||  |||| || |||||| ||||| |||||||||||  ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||||||  ||| | ||| ||| ||    ||   ||||| |||| ||||||||||| |||  ||||||||||||||||||  | |||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |   ||||  |||    | | | | ||||||| | |||   | | ||  |  ||||| ||| | || |||| |||||||||| |||| |||||| |||||||||||||||| |||||| | || |||||||||||||||||||| |||||| ||||||||||| | |||||||| || ||||||||| |  |||||||  |||||||| |||| || ||||||||||| ||||| || |||||| |||||||   |   || |  |  | |   || || |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||| ||||||| || ||| ||||||| |||||| ||||||||||
Sbjct:     1145 GAAGATATAAAAAATCACATAGAATCAAACTATGAATGCTTTTCAGTTACGATGTTGAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAATATTTTCGAGAAAACTACTTCAAAAGTCTATTT---TAGTAGGAGCTCGACATACAAATCCTTTTAACAAACTGATTGAGAATGAGTTGAGTCTTCCATGGATGGCTCGACTAGATCACTTGGAACATAGACTTTTTATTGAACAAACTAATGAAGCTCAATCATCTTTATGGATGGGAAAGACTTCTTTCCAAAGGTTGTCGAGGTTTCACAACGACAAACTAGTTCGTCTAGCCACCTTAAATTATGAGTTCAAACAATCTATTTACAAGACCGAACTTGAACAATTAACAAGGTGGTGTAAATATTGGGGACTTAATGAAATGGGATTTGGTAGAGAAAAAAGTACATACTGTTATTTTGCAGTAGCTTCAGCTTGTTGTTCTTTGCCTTATGATTCTCCAATTCGATTGATGGTTGCAAAGGGTGCTATAATAATAACAATTACAGATGATTTTTTTGATATGAAAGAATCTCTAATTACTGAGTTA-AAAACTTTTACTAAGGCCTTTCAAAGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGAAATGGAAGAAGCAGTAAAGTACGTAAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATTGATGGCTTTACCAATCTTTCAAAAGAGTG-TAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGACGACATTAGCAAAGCAATCTATGTTCCTTTGAA 2457

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BLAST of TPS46 vs. Genbank
Match Name: XM_030624715.1
Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase (LOC115697633), mRNA

HSP 1 Score: 1031.55 bits (558), Expect = 0.000e+0
Identity = 1040/1269 (81.95%), Postives = 1040/1269 (81.95%), Query Frame = 1

Query:       69 GTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGAT-CACAT--ATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACT-A-AAAAC-CATG-T--TCTATGGCTTGGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAAT---TATGTACCTTGATCAACAAGAAACAA-----G-TGACATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACGACGAC-GATG-ATGA-TGTT---A--G-G-GT----TT-TGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                ||| |||||||||| ||| || ||| |||||||||| | ||||  ||||||| |||||  |||||  |||||||||||| |||||||||||| |||||||   | || |  | || || || ||   ||| | || |||||||||||||||||||||||| ||||||||||  ||||||| ||| | ||||||||  |||  ||||||| |||| |  |||| |||| |  ||||||| | ||||||  ||  | || ||||||||| ||  |||||||||||||| || || |||||||||  ||||| || |  || ||||| ||| |||||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||  ||||||||||||||| ||||||||  |||| | ||||||   ||| |||||||||||||| ||  | |||||||  |||| ||  |||| ||  | ||||||||||||||||||||||||| |||  ||||||| |||||| | | ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   ||||||||||||||||||||||| ||     | |||||| || ||||   ||| |||||| |||||||||||||||  ||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| | |||||||| |  | ||||||||  |  |||  | ||    ||||||||  | | |||||||||| || |||||||||||||| || |||||||||||||||||||||||||| |||||| |||| || ||||| |||||||| ||||| ||| ||||||||||| ||||||||||||| ||||||||| |  |||||||| |||||||| ||||||| ||||||||||| |||||| | ||||||||||||||  | ||| |  | |  |  | | ||   |  | | ||    || | ||||||||||| |||||||||||||||||||| || ||||||||||||||||  |||||| |   |||| | |||||||| |||| |||||| || ||| ||||||||||
Sbjct:     1065 GTTGAATCTTTACAGAGCTACTGATTTTGCTTTTCACGGTGAACATGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCA---GTAGGAGCTCGACATACAAATCCCTTTAACAAACTGATTGAGCATGAATTAAGTCTTTCATGGATGGCTAGATTGGATCACTTAGAACATAGAGTTTATATAGAAGCAACTGATCAAACTCATGATGCTCTATGGATGGGAAAG--TC-CTCTCAAAGGTTGTTGAGTGTTCATAATGACAAACTAGTTTGTCTAGCCAATTTAAACTATCGATTGAAACAGTCTCTCTTCAAGACTGAACTCGAGCATTTAACAAGGTGGTGTAAAGAATGGGGACTTAGTGAAATGGGATTCGGTAGAGAGAAAAGTACATATTGTTATTTCGCAGTAGCTTCAGTTTGTTGCTCTTTGGACTATAATTCTCCAATTCGAATGATGATTGCAAAGAGTGCAATTTTAATTACAATAACAGATGATTTTTTTGATATGAAAGGCTCTATAATCACTGAGTTAAACACCTTTACTAAGGCAGTTCAAAGGTGGGATGGTGAAGGGTTGTGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCATGTAAAGGAAATGGCAATCACTATGTACCTTGATCAACAAGAAAAAAATCATGATGACATAACCAATTGGCTAAAAGAAATTTGGTATGAAACAATTTGTTCATGGCTCACTGAATCTGAGTGGAGTAAAAGTGGGATTGTACCAACCATGGATGAATATCTTAAAGTTGGAATGACTTCCATAGCAACTCACACCTTACTTATTCCAGCTTCATTTCTTCTAAAGTCGGGTTTAAAAATG-C--AAT--CGAT----GGAGTATGATAACATTACTAAATTAGTCATGATTATTTGTCGCTTATTGAATGACATACAAAGTTATGAGAAGGAAAAAGATGAAGGTAAACCGAACTCAATCACAGTCTACATGAAGAACAATTCCGAGGTAGAGATGGAAGAAGCAGTAAAGTACGTGAAAGAGATATTAAATAATAAGAAGAAAGAGTTACTTAAACATGTTTTGATTGATGATGACAATAGTTTTACCAATCTTTCTAAAGAGTGTAGGCTTCTACACCTCTCTTGTTTAAAAGTATTTCAAATGTTTTTTAACTCTTCGAATCGATACGATTCAAACACTGAAATACTTGATGACATTGCCAAAGCAATTTATGTTCCTTTGAA 2318

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BLAST of TPS46 vs. Genbank
Match Name: XM_030623148.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X1, mRNA

HSP 1 Score: 1029.7 bits (557), Expect = 0.000e+0
Identity = 1079/1331 (81.07%), Postives = 1079/1331 (81.07%), Query Frame = 1

Query:        1 TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGAATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTTTTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTACTTGAGAAATGTATTTCAATGGAAGAAAATGGAGAT-CACAT--ATTTCATAATCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACCTCGAACATAGGTTTTGGATAGAAGAAACTAA-AAACCATGTTCTATGGCTTGGAAAGA-ATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAATTCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTGAACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAACTTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAGGTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCCTTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGT------GACATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGA-TC--GAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGA---CAACGACG--ACGA-TGAT------GA-TGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                |||||| || | || || ||||| |||||  |||| ||    ||||  ||||||||||   ||    || |||||||||||| ||| || |||||||||||||| | ||||||||||||| |||||  |||||  |||||||||||| |||||||||||| |||||||   |||| |  |  | || || ||   ||| | || |||||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||||||  || ||| ||||||| ||| |   || ||||| | ||||||| ||| ||  | |||||| | ||   || | ||||| |||||| ||||||||||||  ||||| ||| | |||||||| | ||| | |||| ||||||| ||||| ||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||| ||||||   ||||  ||| ||||||||||||||||||||||||||||  | || |||| |||||||||||| |||||||  | |||||||||||||||||||||| |||  || |||| || ||| ||  ||| ||||||||||||||||||||| ||  |||||| ||||||||||||||||| || ||||||||||||||||||||| |||||| ||||||| ||| |||||||||||| |||||||||| ||||      ||||| || |  | | ||||| |||| ||||||||||| |||  ||||||||||||||||||| | |||||||||||||| ||| ||||||||||||| |||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||| | |||| || || | |||||||| ||| |||||||||| || ||||||||  |  |||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||  |||| | | || ||||||||||||||||||||||| ||| ||||||| |||   ||| |||||| |   ||||||| | |  ||||| || |||||||| ||||  | |||||||| || || ||||||||||||||||||||   ||| | |   || | |  |      || || |||| || | ||| | ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||   |||||||||||| || |||  ||||||||| || |||||||||||
Sbjct:     1104 TGGTTCCTAAAGAATGAGGAAATAAAAAACTACATAGAATTCAACTCTGAATACTTTTTTGTTGCAATGCTAAATCTTTACAGAGCTACTGATCTTGCTTTTCATGGTGAATTTGAGCTTGATGAACTAAGAACATTTTCAAGAAAATTACTTGAGAAATCTATTTCA---GAAGGAGCTCAACATACAAATCCCTTTAAGAAACTGATTGAGCATGAGTTAAGTCTTCCATGGATGGCTCGACTAGATCACCTCGAACATAGGTTTTTTATCGAACAAACTAATAAAGC---TT-TATGGATGGGAAAGACATC-TTCACAAAGGTTATCAAAGTTTTACAATGATAAATTACTTCGTCTAGCCACTTTAAACTACGAGTTCAAACAGTATATTTACAAGACTGAACTTGAACAGTTAACAAGGTGGTCTAAAAAATGGGGACTTAGTGAAATGGGATTTGGTAGAGAAAAAAGTACATACAATTATTTTGCAGTAGCTTGTGCTTGCTGTTATTTGCCTTATGATTCTCCAATTCGATTGATGATTACAAAGGGTGCTATAATAGTAACGGTTGCTGATGATTTTTTTGATATGAAAGGCTCTCTATTCACTGATTTAAAATTCTTCACTAAGGCAATTCAAAGGTGGAATAATGAAGGGTTGAGTGGTGTTAGTAAAAAGATATTTGATGCCCTAGATAATCTTGTAAGGGAAATGTCAACTATGTACCTTGAACAACAAGAAAAAAGTCATGAAGACATAACCAGCTACATAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCTGAGTGGAGTAAAAGTGGAATTGTACCAACCATGGAAGAATATTTTAAAGTTTCAATGACTTCTGTAGCAACTCATACCTTGCTTCTTCCAGCTTCATTTCTTCTGAAACCGACCTTAAAAAAATCTCAATTACAATTAATGGAGTATGAAAGTGTTACTAAATTGGTCATGATTATTTGTCGTTTGTTGAATGACTTACAAAGTTCTGAGAGGGAAAGAGAAGAAGGCAAACCAAACTCAATTACAGTTTACATGAAGAATAATTTTGAGATAGAGAATAAGGAAGAAGTAGTAAAGTACTTGAAAGAGATATTAAACGATAAGAAGAAGGAGTTCCTTGAGCATGTTTTGATTGATGACAATGGCTTTACCAATCTTCCTAAAGAGTG-TAGGCTTCTACACTTATCTTGCTTAAAAGTATTCCAAATGTTCTTTAACTCTTCGAATCGATATGATTCAGACACTGAATTGCTTGAAGACATTAACAAAGCGATTTACATTCCTTTGAA 2425

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BLAST of TPS46 vs. Genbank
Match Name: XM_030623147.1
Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X2, mRNA

HSP 1 Score: 573.582 bits (310), Expect = 1.837e-162
Identity = 569/693 (82.11%), Postives = 569/693 (82.11%), Query Frame = 1

Query:      632 CAATTCA-AAGGTGGGATGGTGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATTTTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAA----CAA--GTGACATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCTTACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAATATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCAGCTTCATATTTTCTAA-AG--CCAAGCTTAAAAATAT-C-C-CAATTACAATCAACGGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGAATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCAATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAATCGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGCATGTTTTGATTGACAACG--ACGA--CGATGAT--GA-TGTTAGGGTTTTGCACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGATTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTTTGAA 1304
                ||||| | ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| ||||||||||     ||   |||||| || ||||   ||||| |||| ||||||||||| |||  ||||||||||||||||||  | |||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |   ||||  |||    | | | | ||||||| | |||   | | ||  |  ||||| ||| | || |||| |||||||||| |||| |||||| |||||||||||||||| |||||| | || |||||||||||||||||||| |||||| ||||||||||| | |||||||| || ||||||||| |  |||||||  |||||||| |||| || ||||||||||| ||||| || |||||| |||||||   |   || |  |  | |   || || |||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||| ||||||| || ||| ||||||| |||||| ||||||||||
Sbjct:     1544 CAATTAACAAGGTGGGATGGTAAAGAGTTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATCTTGTAAGTGAAATGGCAACTATGTACCTTGAACAACAAGAAAATAGTAATCATGACATAACCAATTGGCTAAGAAAAATTTGGTATGAAACGATTTGTTCATGGCTTACTGAATCGGAGTGGAGTAAAAATGGGATTGTACCAACCATGGATGAATATCTGAAAGTTGGAATGACTTCCATAGCAACTCACACCTTGCTTCTTCCAGCTTCTTGTTTTGTAATAAATCCAACTTTACCGGTCTACTCTCAATTACGACCAATTCAATGTGAGAGTGTTACAAAACTCGTCATGACTATTTGTCGTCTGTTAAATGACTTACAAAGTTATGAGAAGGAAAAAGAAGAAGGCAAACCAAACTCAATTACTGTGTACATGAAGAACAATTCTGAGGTAGAAATGGAAGAAGCAGTAAAGTACGTAAAAGAGATATTAAACAAGAAGAAGAAAGAGTTACTCGAACATGTTATGATTGATGGCTTTACCAATCTTTCAAAAGAGTG-TAGGCTTCTACACCTCTCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATATGATTCAGACACTGAAATGCTTGACGACATTAGCAAAGCAATCTATGTTCCTTTGAA 2235


Match Name	Summary
XM_030624716.1	E-Value: 3.491e-70, PID: 98.48 Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase-like (LOC115697634), mRNA [more]
XM_030623146.1	E-Value: 0.000e+0, PID: 81.71 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X1, mRNA [more]
XM_030624715.1	E-Value: 0.000e+0, PID: 81.95 Description: PREDICTED: Cannabis sativa (E,E)-geranyllinalool synthase (LOC115697633), mRNA [more]
XM_030623148.1	E-Value: 0.000e+0, PID: 81.07 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696242), transcript variant X1, mRNA [more]
XM_030623147.1	E-Value: 1.837e-162, PID: 82.11 Description: PREDICTED: Cannabis sativa S-linalool synthase (LOC115696241), transcript variant X2, mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..67
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..27
None	No IPR available	TMHMM	TMhelix		coord: 28..50
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PANTHER	PTHR31739:SF25	(E,E)-GERANYLLINALOOL SYNTHASE	coord: 1..436
None	No IPR available	PANTHER	PTHR31739	FAMILY NOT NAMED	coord: 1..436
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 128..441 e-value: 1.5E-77 score: 262.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 112..417
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 14..73 e-value: 1.1E-7 score: 31.8
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 1..124 e-value: 2.3E-29 score: 104.4
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 118..380 e-value: 8.8E-65 score: 218.7
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 15..92

TPS46

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGA ATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTT TTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTA CTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAA TCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACC TCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTT GGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAAT TCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTG AACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATG GGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAAC TTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAG GTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCC TTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGTGGGATGG TGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATT TTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGAC ATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCT TACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAAT ATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCA GCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAAC GGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGA ATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCA ATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAAT CGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGC ATGTTTTGATTGACAACGACGACGATGATGATGTTAGGGTTTTGCACCTC TCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGA TTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTT TGAAGTTAGATGGATTAGCATCTAATAAA
Sequence Length	1329
Sequence Checksum	2285c3d89d2954b615d94d59f1ad8ea6

Sequence

TGGTTCTTACATAACGAAGAAATTAAAAATCACATCGAGACAAACTGCGA
ATACTTTTCGATTATGTTGTTAAATCTTTACAAAGCCACAGATCTTGCTT
TTCAAGATGAATTTGAGCTTAATGAAGCAAGAAATTTTTCAAGAAAACTA
CTTGAGAAATGTATTTCAATGGAAGAAAATGGAGATCACATATTTCATAA
TCTGATTGAGCATGAATTAAGTCTTCCATGGATGGCCCGATTGGACCACC
TCGAACATAGGTTTTGGATAGAAGAAACTAAAAACCATGTTCTATGGCTT
GGAAAGAATCATTTTCGAAGGTTGTTAAGCATTCATAATGACAAATTAAT
TCGTCTAGCCATCTTAAATTACCACTTCAAACAATCTATCTTCAAGGCTG
AACTCGAACACTTAACAAGGTGGTGTAAAGATTGGGGACTTAGTGAAATG
GGATTTGGTAGAGAAAAAAGTATGTATTGTTATTTCGCAATAGCTTCAAC
TTGTAGTTCTTTGCCTTATGATTCTCCAATTCGATTGGCGGTTGCAAAAG
GTGCTATAATAATAACGGTGACAGATGATTTTTTTGATATGAAAGACTCC
TTAATCACCGAGTTAGAAAACTTTACTAAGGCAATTCAAAGGTGGGATGG
TGAAGGATTGAGTGGTGTTAGTAAGAAAATATTTGATGCCCTAGATAATT
TTGTAAAGGAAATGGCAATTATGTACCTTGATCAACAAGAAACAAGTGAC
ATCACAAATTTCTTAAGAGAAATATGGTATGAAACAATTGTTTCATGGCT
TACTGAATCTAAATGGAGTAAAAGTGGGATTATACCAACCATGGATGAAT
ATTTTAAAGTTGGAATGACTTCTATAGCAACTCACACCTTGCTTCTTCCA
GCTTCATATTTTCTAAAGCCAAGCTTAAAAATATCCCAATTACAATCAAC
GGAGTATGCCATCGTTACTAAATTGGTTATGATTATTTGTCGTTTGTTGA
ATGACATACAAAGTTATGAGAAAGAAAAAAATGAGGGCAAACCAAACTCA
ATTACAGTGTACTTGAAGAACAATCCCGAGGTAGAGATCGAAGAAGCAAT
CGAGTACGTGCAAGAGATACTAAATAAAAAGAAGAAAGAATTACTTGAGC
ATGTTTTGATTGACAACGACGACGATGATGATGTTAGGGTTTTGCACCTC
TCTTGCTTAAAAGTATTTCAAATGTTCTTCAACTCTTCGAATCGATTTGA
TTCAGAGGTTGAATTGCTTGATGATATTGGCAAAGCGATCTATATTCCTT
TGAAGTTAGATGGATTAGCATCTAATAAA

Sequence Length

1329

Sequence Checksum

2285c3d89d2954b615d94d59f1ad8ea6

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS46
Identifier	TPS46
Time Accessioned	Thursday, November 21, 2024 - 09:14
Time Last Modified	Thursday, November 21, 2024 - 09:14