TPS60 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR005630	Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of TPS60 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 651.141 bits (352), Expect = 0.000e+0
Identity = 372/382 (97.38%), Postives = 372/382 (97.38%), Query Frame = 1

Query:      280 GACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                ||||||||||| |||||||||||||| ||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72080047 GACGTGTTCAATAAGTTCACGAACAACGAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTGAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 72079666

HSP 2 Score: 640.061 bits (346), Expect = 0.000e+0
Identity = 370/382 (96.86%), Postives = 370/382 (96.86%), Query Frame = 1

Query:      280 GACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                ||||||||||| |||||||||||||| ||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72090261 GACGTGTTCAATAAGTTCACGAACAACGAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTGAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAAGCAAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 72089880

HSP 3 Score: 632.674 bits (342), Expect = 4.903e-179
Identity = 369/382 (96.60%), Postives = 369/382 (96.60%), Query Frame = 1

Query:      280 GACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                |||||  |||| |||||||||||||| ||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72069097 GACGTTGTCAATAAGTTCACGAACAACGAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTGAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAA-TCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 72068717

HSP 4 Score: 544.035 bits (294), Expect = 2.363e-152
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 1

Query:     1294 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72077339 CAGTGGAGGGAAAGGAGAACAGAAAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 72077040

HSP 5 Score: 544.035 bits (294), Expect = 2.363e-152
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 1

Query:     1294 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72087451 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAAAAAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 72087152

HSP 6 Score: 538.495 bits (291), Expect = 1.100e-150
Identity = 298/301 (99.00%), Postives = 298/301 (99.00%), Query Frame = 1

Query:     1294 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTG-TGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72066390 CAGTGGAGGGAAAGGAGAACAGAAAAAGTAGATTTTTCAGCTGGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 72066090

HSP 7 Score: 496.022 bits (268), Expect = 6.712e-138
Identity = 276/280 (98.57%), Postives = 276/280 (98.57%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTG 280
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72090730 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTATATGTCATGTG 72090451

HSP 8 Score: 455.396 bits (246), Expect = 1.139e-125
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAG 1296
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 72088582 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTCATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAACCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCTACCAG 72088328

HSP 9 Score: 444.316 bits (240), Expect = 2.466e-122
Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAG 1296
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 72078465 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTCATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAACCTAAAAGTGTGCGGACTCTGTCGATCGTCGGTAGAGTTCTTAATGACATTGGCTTCTACCAG 72078211

HSP 10 Score: 420.31 bits (227), Expect = 4.156e-115
Identity = 247/256 (96.48%), Postives = 247/256 (96.48%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTG-CTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAG 1296
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 72067517 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTCTCTGCTTCTCCTCTACTCATTGCTATTTCATTCATTGGAATGCCAAATGTTGTTACAAAAGATTCTA--AATTGGATCTTTTCTCATCCACAACCTAAAAGTGTGCGGACTCTGTCGATCGTCGGTAGAGTTCTTAATGACATTGGCTTCTACCAG 72067264

HSP 11 Score: 388.917 bits (210), Expect = 1.172e-105
Identity = 218/222 (98.20%), Postives = 218/222 (98.20%), Query Frame = 1

Query:      657 AAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAG 878
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct: 72079578 AAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTCTCCAGGAGCTACACCTCTTAACTGAAGCAATACAAAG 72079357

HSP 12 Score: 388.917 bits (210), Expect = 1.172e-105
Identity = 231/241 (95.85%), Postives = 231/241 (95.85%), Query Frame = 1

Query:      657 AAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGATATATATGTATATATATA 897
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || | ||  ||| |||||
Sbjct: 72089792 AAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTGAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGGACTCTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGGTACA-ATAAATAAATATA 72089553

HSP 13 Score: 381.53 bits (206), Expect = 1.961e-103
Identity = 217/222 (97.75%), Postives = 217/222 (97.75%), Query Frame = 1

Query:      657 AAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAG 878
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct: 72068629 AAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTT-GCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTCTCCAGGAGCTACACCTCTTAACTGAAGCAATACAAAG 72068409

HSP 14 Score: 283.658 bits (153), Expect = 5.689e-74
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 1

Query:      880 TATATATGTATATATATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 1041
                ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72088899 TATTTATATATATGTATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 72088738

HSP 15 Score: 276.271 bits (149), Expect = 9.519e-72
Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 1

Query:      884 TATGTATATATATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 1041
                ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72067810 TATATAAATTTATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 72067653

HSP 16 Score: 276.271 bits (149), Expect = 9.519e-72
Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 1

Query:      884 TATGTATATATATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 1041
                ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72078760 TATATAAATTTATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 72078603

HSP 17 Score: 239.338 bits (129), Expect = 1.249e-60
Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 1

Query:      146 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTG 280
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72080322 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGATGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTATATGTCATGTG 72080188

HSP 18 Score: 226.412 bits (122), Expect = 9.723e-57
Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 1

Query:      146 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTG 280
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 72069367 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAA-AATGACGACGATGATCTTTATGTTGTTGCTCTTCGATTTCGATTG-TTAGACAACAAGGTTATTATATGTCATGTG 72069235

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BLAST of TPS60 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 632.674 bits (342), Expect = 4.903e-179
Identity = 370/383 (96.61%), Postives = 370/383 (96.61%), Query Frame = 1

Query:      280 GACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTG-GAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                ||||||||||| ||||||||||||||  |||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 52190226 GACGTGTTCAATAAGTTCACGAACAACAAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACC-TATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCT-ACAAGGT 52189846

HSP 2 Score: 516.336 bits (279), Expect = 5.152e-144
Identity = 293/300 (97.67%), Postives = 293/300 (97.67%), Query Frame = 1

Query:     1294 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52187601 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTCTCAGCTGTGAATTGTTATATAAAACAATATGGTGTCGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGCATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCCTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 52187302

HSP 3 Score: 479.403 bits (259), Expect = 6.760e-133
Identity = 273/280 (97.50%), Postives = 273/280 (97.50%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTG 280
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 52190640 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATGCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCGATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGATGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTATATGTCATGTG 52190361

HSP 4 Score: 442.47 bits (239), Expect = 8.869e-122
Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTT 1289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 52188608 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTACGGACTCTGTCAATCGTCGGTAGAGTTCTTAACGACATTGGCTT 52188361

HSP 5 Score: 392.61 bits (212), Expect = 9.059e-107
Identity = 232/241 (96.27%), Postives = 232/241 (96.27%), Query Frame = 1

Query:      657 AAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGATA-TATATGTATATATAT 896
                ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  || ||||||
Sbjct: 52189759 AAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAA-GAATAATGGATTGTTACTTTTGGACTTT-GGAGTG-TTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGGTACTATAAATAAATATAT 52189522

HSP 6 Score: 248.571 bits (134), Expect = 2.075e-63
Identity = 155/165 (93.94%), Postives = 155/165 (93.94%), Query Frame = 1

Query:      879 ATATATATGTATATAT--ATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 1041
                |||| ||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 52188895 ATATTTATTTATATATGTATATATATGAGTAGGTGGGATATGTGTTTGATTGACCAACTACCAGAGTACATTCAACCATGTTACAAAGAAATTTTGAATCTTTCCACTGAAATTGGAGAATTTACTAAGGAAAAATCATATTGCCTTAACTACGCTAAGAAAGGA 52188731

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BLAST of TPS60 vs. Genbank
Match Name: CM010797.2
Description: Cannabis sativa cultivar Purple Kush chromosome 6, whole genome shotgun sequence

HSP 1 Score: 134.079 bits (72), Expect = 6.063e-29
Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 1

Query:      879 ATATATATGTATATA--TATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAA 967
                |||| ||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 37430490 ATATTTATTTATATATGTATATATATGAGTAGGTGGGATATGTGTTTGATTGACCAACTACCAGAGTACATTCAACCATGTTACAAAGAAA 37430580


Match Name	Summary
CM010792.2	E-Value: 4.903e-179, PID: 97.38 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]
CM010796.2	E-Value: 4.903e-179, PID: 96.61 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]
CM010797.2	E-Value: 6.063e-29, PID: 93.41 Description: Cannabis sativa cultivar Purple Kush chromosome 6, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
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BLAST of TPS60 vs. Genbank
Match Name: PKGMv1-785_t
Description: No definition line

HSP 1 Score: 992.771 bits (537), Expect = 0.000e+0
Identity = 547/552 (99.09%), Postives = 547/552 (99.09%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      364 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTCATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAACCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCTACCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAAAAAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 915

HSP 2 Score: 444.316 bits (240), Expect = 3.252e-123
Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTG 249
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct:      115 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTG 363

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BLAST of TPS60 vs. Genbank
Match Name: PKGMv1-66363_t
Description: No definition line

HSP 1 Score: 948.452 bits (513), Expect = 0.000e+0
Identity = 539/552 (97.64%), Postives = 539/552 (97.64%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      283 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTACGGACTCTGTCAATCGTCGGTAGAGTTCTTAACGACATTGGCTTTTATCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTCTCAGCTGTGAATTGTTATATAAAACAATATGGTGTCGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGCATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCCTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 834

HSP 2 Score: 427.696 bits (231), Expect = 3.276e-118
Identity = 243/249 (97.59%), Postives = 243/249 (97.59%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTG 249
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct:       34 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATGCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCGATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGATGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTG 282

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BLAST of TPS60 vs. Genbank
Match Name: PKGMv1-782_t
Description: No definition line

HSP 1 Score: 800.72 bits (433), Expect = 0.000e+0
Identity = 447/454 (98.46%), Postives = 447/454 (98.46%), Query Frame = 1

Query:     1041 ATTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTT 1494
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct:      546 ATTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTCATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAACCTAAAAGTGTGCGGACTCTGTCGATCGTCGGTAGAGTTCTTAATGACATTGGCTTCTACCAGTGGAGGGAAAGGAGAACAGAAAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTT 999

HSP 2 Score: 630.828 bits (341), Expect = 2.326e-179
Identity = 359/368 (97.55%), Postives = 359/368 (97.55%), Query Frame = 1

Query:      294 GTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                |||||||||||| ||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      177 GTTCACGAACAACGAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTGAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 544

HSP 3 Score: 187.632 bits (101), Expect = 6.052e-46
Identity = 115/121 (95.04%), Postives = 115/121 (95.04%), Query Frame = 1

Query:      146 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTA-GA-CAAC-AAGG 263
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | | || |||| ||||
Sbjct:       74 TTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGATGATCTTTATGTTGTTGCTCTTCGATTTCGATTGTTCACGAACAACGAAGG 194


Match Name	Summary
PKGMv1-785_t	E-Value: 3.252e-123, PID: 99.09 Description: No definition line [more]
PKGMv1-66363_t	E-Value: 3.276e-118, PID: 97.64 Description: No definition line [more]
PKGMv1-782_t	E-Value: 2.326e-179, PID: 98.46 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
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BLAST of TPS60 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 651.141 bits (352), Expect = 0.000e+0
Identity = 372/382 (97.38%), Postives = 372/382 (97.38%), Query Frame = 1

Query:      280 GACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 661
                ||||||||||| ||||||||||||||  |||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77982931 GACGTGTTCAATAAGTTCACGAACAACAAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGT 77982550

HSP 2 Score: 516.336 bits (279), Expect = 5.062e-144
Identity = 293/300 (97.67%), Postives = 293/300 (97.67%), Query Frame = 1

Query:     1294 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77980301 CAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTCTCAGCTGTGAATTGTTATATAAAACAATATGGTGTCGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGCATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCCTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 77980002

HSP 3 Score: 479.403 bits (259), Expect = 6.641e-133
Identity = 273/280 (97.50%), Postives = 273/280 (97.50%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTG 280
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 77983345 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATGCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCGATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGATGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTATATGTCATGTG 77983066

HSP 4 Score: 442.47 bits (239), Expect = 8.714e-122
Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 1

Query:     1042 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTT 1289
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 77981308 TTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTACGGACTCTGTCAATCGTCGGTAGAGTTCTTAACGACATTGGCTT 77981061

HSP 5 Score: 411.077 bits (222), Expect = 2.457e-112
Identity = 235/241 (97.51%), Postives = 235/241 (97.51%), Query Frame = 1

Query:      657 AAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGATA-TATATGTATATATAT 896
                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  || ||||||
Sbjct: 77982462 AAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAGGTACTATAAATAAATATAT 77982222

HSP 6 Score: 248.571 bits (134), Expect = 2.039e-63
Identity = 155/165 (93.94%), Postives = 155/165 (93.94%), Query Frame = 1

Query:      879 ATATATATGTATATAT--ATATATATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGA 1041
                |||| ||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 77981595 ATATTTATTTATATATGTATATATATGAGTAGGTGGGATATGTGTTTGATTGACCAACTACCAGAGTACATTCAACCATGTTACAAAGAAATTTTGAATCTTTCCACTGAAATTGGAGAATTTACTAAGGAAAAATCATATTGCCTTAACTACGCTAAGAAAGGA 77981431


Match Name	Summary
NC_044377.1	E-Value: 5.062e-144, PID: 97.38 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of TPS60 vs. Genbank
Match Name: XM_030622632.1
Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695575), mRNA

HSP 1 Score: 1522.76 bits (824), Expect = 0.000e+0
Identity = 860/878 (97.95%), Postives = 860/878 (97.95%), Query Frame = 1

Query:        1 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGTGAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTACATGTCATGTGACGTGTTCAACAAGTTCACGAACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAATGTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAG 878
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:       88 ATGAAGGAAAATAATGATGATAGTGAAATAGTTATGCTGAAGAAAGAAGTGAAGAAGAAAATAGTTGAGCTTGACTATGTTGAAAACCGATTAGAGACACTTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAAAATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGAAAATAATGATGACGATGATCTCTATGTTGTTGCTCTTCGATTTCGATTGGTTAGACAACAAGGTTATTATATGTCATGTGACGTGTTCAATAAGTTCACGAACAACAAAGGGAAATTTGAAGAGTCACTTTGTAACGATATTCGAGGAATGTTAAGCTTATATGAAGCGTCACAACTAAGAGTGCATGGAGAGAAAATACTAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGCAGCTAAAACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAAAAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGTCTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCTATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGATCTCACAAGGTGGTGGAAGGAGTTTGATTATGAAAGAAGGCAATCGTTCTCTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTTGAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTTGCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGCTACACCTCTTAACTGAAGCAATACAAAG 965

HSP 2 Score: 1164.51 bits (630), Expect = 0.000e+0
Identity = 668/687 (97.23%), Postives = 668/687 (97.23%), Query Frame = 1

Query:      907 AGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCAACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTACTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGATTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGACTCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATAAGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGGATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1593
                ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      964 AGGTGGGATATGTGTTTGATTGACCAACTACCAGAGTACATTCAACCATGTTACAAAGAAATTTTGAATCTTTCCACTGAAATTGGAGAATTTACTAAGGAAAAATCATATTGCCTTAACTACGCTAAGAAAGGATTCCAAGAGCTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAATCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTCCTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAAGATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTACGGACTCTGTCAATCGTCGGTAGAGTTCTTAACGACATTGGCTTTTATCAGTGGAGGGAAAGGAGAACAGAGAAAGTAGATTTCTCAGCTGTGAATTGTTATATAAAACAATATGGTGTCGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACAAGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACAATATGAATATCCCAATGCCACTTCTAATGCGAGTTCTTGATCTTGTACGCATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCCTTCATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC 1650


Match Name	Summary
XM_030622632.1	E-Value: 0.000e+0, PID: 97.95 Description: PREDICTED: Cannabis sativa (-)-germacrene D synthase-like (LOC115695575), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..64
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..50
None	No IPR available	TMHMM	TMhelix		coord: 29..51
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 6..529
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 6..529
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 395..531
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 373..394
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..372
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..42
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 43..52
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..33 score: 0.503
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 197..474 e-value: 4.9E-86 score: 288.4
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 7..206 e-value: 9.2E-67 score: 226.3
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 7..166 e-value: 2.5E-53 score: 180.7
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 207..531 e-value: 1.7E-99 score: 334.7
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 192..530
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 12..191

TPS60

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGT GAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACAC TTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAA AATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGA AAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGG TTAGACAACAAGGTTATTACATGTCATGTGACGTGTTCAACAAGTTCACG AACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAAT GTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATAC TAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAA ACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAA AAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGT CTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCT ATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGA TCTCACAAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCT CTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTT GAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTT GCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGC TACACCTCTTAACTGAAGCAATACAAAGATATATATGTATATATATATAT ATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCA ACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTA CTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGATTCCAAGAG CTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAA TCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTC CTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAA GATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGAC TCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGA GGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATA AGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACA AGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACA ATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGG ATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTT CATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC
Sequence Length	1593
Sequence Checksum	603e84e5765cefae404d3abc544d6e57

Sequence

ATGAAGGAAAATAATGATGATAGTGAAATAGTTATTCTGAAGAAAGAAGT
GAAGAAGAAAATACTTGAGCTTGACTATGTTGAAAACCCATTAGAGACAC
TTGAATTTATTGATTCAATTCAACGATTGGGAGTGTCGTACTATTTTGAA
AATCAAATTGAAGTAGTTTTGAAGAACATATGTAACAAATTTCACGAGGA
AAATAATGACGACGGTGATCTTTATGTTGTTGCTCTTCGATTTCGATTGG
TTAGACAACAAGGTTATTACATGTCATGTGACGTGTTCAACAAGTTCACG
AACAATGAAGGAAAATTCAAAGAGTCACTTTTTAACGATATTCGAGGAAT
GTTAAGCTTATATGAGGCTTCACAACTAAGAGTGCATGGAGAGAAAATAC
TAGATGATGCCCTAATATTCACAACAAATCACCTCGAATCTGGAGCTAAA
ACCTCGAAATTAAGCTCTCATATTTCAAACCAAGTAAATCACGCGTTGAA
AAACCCTATTCGAAAGAGCTTGCAAAGGAGACAGGCTAGACATTACATGT
CTTTATACCATCAAATCTCTTCTCACAATGAGCATCTTCTAGCTCTAGCT
ATACTAGATTTCAACTTGCTACAAAAACTTTACCAGAAGGAATTAAGTGA
TCTCACAAGGTGGTGGAAGAAGTTTGATTATGAAAGAAGGCAATCGTTCT
CTAGAGAAAGAATAATGGATTGTTACTTTTGGACTTTTGGAGTGTTTTTT
GAGGCTCAAACCTCACATATTAGGTTGCTGATGAGCAAGTTGATTGCTTT
GCTCACTCTTGTTGATGATATTTATGATAACTTTGGAACTTTTCAAGAGC
TACACCTCTTAACTGAAGCAATACAAAGATATATATGTATATATATATAT
ATGAGTAGGTGGGATATGTGTTTGATTGATCAACTACCAGAGTACATTCA
ACCATGTTACAAGGAAATCTTGAATCTTTACACTGAAATTGGAGAATTTA
CTAAGGACAAATCATATTGCCTTAGCTACGCTAAGAAAGGATTCCAAGAG
CTAGTAAAAGGGTACTTTGAGGAAGCCAAATGGTTACACCAAAAACATAA
TCCAACACTAGATGAGTATATGCCAATTGCACTTGTTACTGCTGCTTCTC
CTCTACTCATTGCTATTTCATTTATTGGAATGCCAAATGTTGTTACAAAA
GATTCTATGAATTGGATCTTTTCTCATCCACAGCCTAAAAGTGTGCGGAC
TCTGTCGATCGTTGGTAGAGTTCTTAACGACATTGGCTTCCACCAGTGGA
GGGAAAGGAGAACAGAGAAAGTAGATTTTTCAGCTGTGGATTGTTATATA
AGACAATATGGTGTGGAAGAAGAAGAAGCAATACAAAGACTTAAAGAACA
AGTTAGTGATTCATGGAAAGATCTGAATGAAGAGTGTCTCTATCCCAACA
ATATGAATATCCCAATGCCACTTCTAATGAGAGTTCTTGATCTTGTACGG
ATGAATAATGAATTATACAGAGAAGGAGATGGTTTTACAAGAGAAGCTTT
CATCAAAGATTTGATTGATTCTCTCATCATCAATCCCTACATC

Sequence Length

1593

Sequence Checksum

603e84e5765cefae404d3abc544d6e57

Summary

Resource Type	mRNA
Organism	Cannabis sativa L.
Name	TPS60
Identifier	TPS60
Time Accessioned	Thursday, November 21, 2024 - 10:18
Time Last Modified	Thursday, November 21, 2024 - 10:18