TPS40

Annotations
This record has the following annotations.
TermNameDefinition
GO:0000287magnesium ion bindingInteracting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829lyase activity
GO:0010333terpene synthase activityCatalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965Terpene_synth_N_sf
INTERPRO:IPR001906Terpene_synth_N
INTERPRO:IPR008949Isoprenoid_synthase_dom_sf
INTERPRO:IPR005630Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availablePANTHERPTHR31225:SF9coord: 30..579
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 30..579
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..49
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
NoneNo IPR availableCOILSCoilCoilcoord: 36..40
IPR005630Terpene synthase, metal-binding domainPFAMPF03936Terpene_synth_Ccoord: 259..525
e-value: 4.6E-99
score: 331.1
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 40..564
e-value: 5.3E-192
score: 640.7
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 254..579
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 41..208
e-value: 9.4E-49
score: 165.7
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 77..253
e-value: 5.3E-192
score: 640.7
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 38..254

TPS40
Sequences
Sequence
TCAAAATCAAAATCAAGTACTTGCTACCCCATCCAATGTACTGTGGTCAA
TAATAGTAGCCCTAGCTCTACTACTAAATTTTCTATTGTTCGAAGATCGG
CAAATTATGAACCTCCGATTTGGTCTTTCGATTACATTCAATCTCTTTCA
ACCCAATATAAGGGAGAATCCTATACAAGGCAATTAAATAAGTTAAAGAA
AGAAGTGAAAAGGATGCTCCTTCGAATGGAAGTTAACTCTTTAGCCCTAC
TCGAGTTAATCGATACATTGCAAAGGCTTGGAATATCTTATCATTTTAAG
AATGAAATAAACACTATTTTGAAGAAAAAATACACAAATACTTATATTAA
CAATAATATTACTAACCATAATTATAATTTATACCCCATTGCTCTCGAAT
TTAGGCTTCTACGCCAACATGGCTATGCAGTTCCTCAAGAAATTTTTAAT
ATTTTCAAAGACGTGAGTGGAAAATTTAAAGCAATCATAAATGACGATGA
TATTATGGGAATATTGGCGTTATATGAAGCTTCATTCTATGAGAAAAATG
GTGAAAGCATATTGGAGGAAGCTAGGGTTTTCACAACCAAGTGTCTCGAA
AATTACATGATGATAACGGAGGAAAACAAATTAGATGATGATGATGATCG
TAATAATATTATTGTAGTAATTAGACATGCGTTAGAGCTTCCACTTCATT
GGAGGACTGCAAGAACGGAGGCCAAGTGGTTTATCGATGTATACGAGAAA
AGACAAGATATGAATTCTACTTTGCTTGAGTTTGCAAAACTAGATTTCAA
CATGGTACAATCAATGCATCAAGACGATCTAAAACATTTGTCTAGGTGGT
GGAGTCATACTAAACTCGGAGAAAAACTGAATTTTGTGAGAGATAGGTTG
ATGGGGTGTTTTTTATGGAATGTTGGATTAAGATTTGAGCCAGATTTCAG
CTACTTTAGGAGAATATCTGCAAGAATATATGTTCTTATTACAATAATCG
ATGATATATATGATGTTTACGGAACATTAGAAGAATTAGAGCTTTTCACT
CGTGTTGTTGAGAGATGGGATGTAAAACTACTAAAAGACTTACCAGATTA
TATGAAGATGCCTTTTCTTGTTTTACACAATACCATTAATGAAATGGCAT
TAGATGTATTAAAAGAAAAACACTTTGTCAACATTGAATGCCTCAAGAAA
ACGTGGGTTGATATGTGTAGATCTTTTCTACAAGAGGCAAAATGGTACTA
TAATGGATACACACCAACATTTCAAGAATACATTGAAAATGGTTGGATTT
CAGTAGGAGCACCAGTTATTCTTGTGCATGCTTATTTCTCTTTTGCAAAT
CCCATAACTAAAGAGGTTTTGGAAATCTTCCAACAAGGTTATCCCACAAT
AATTCGTCAATCTGCCATGATCGTACGTTTGGCAAATGATCTAGCAACAT
CATCTGAGGAATTCGAAAGAGGTGACTCGCCTAAATCAATTCAATGTTAC
ATGCAAGACCATAATGTATCTAAAGAGGAAGCTCATGAATACATTAAGTT
TTCAATAAGAGAAACATGGAAGGAGATGAATAGTACTTTTAATATTGAAG
ATGGAAATTCATCATTGGTTGATGATGCCAAAAACTTTGCAAGAATGGGA
TTATTTATGTATCAACATGGAGATGGACATAGTTCTCAAGATAATTTAGC
AAAAGAGCGTATTTCGAAATTCATTATCAATCCTATA
Sequence Length
1737
Sequence Checksum
82f205826d80e0d9febc7e5dbb7970b6
Summary
Resource Type
mRNA
Organism
Name
TPS40
Identifier
TPS40
Time Accessioned
Friday, October 21, 2022 - 20:06
Time Last Modified
Friday, October 21, 2022 - 20:06