TPS52

Annotations
This record has the following annotations.
TermNameDefinition
GO:0000287magnesium ion bindingInteracting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829lyase activity
GO:0010333terpene synthase activityCatalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965Terpene_synth_N_sf
INTERPRO:IPR008949Isoprenoid_synthase_dom_sf
INTERPRO:IPR001906Terpene_synth_N
INTERPRO:IPR005630Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..41
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 45..629
NoneNo IPR availablePANTHERPTHR31225:SF74TRICYCLENE SYNTHASE, CHLOROPLASTICcoord: 45..629
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
IPR005630Terpene synthase, metal-binding domainPFAMPF03936Terpene_synth_Ccoord: 294..560
e-value: 1.8E-97
score: 325.9
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 78..233
e-value: 4.7E-46
score: 156.9
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 304..631
e-value: 9.0E-126
score: 421.0
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 289..628
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 73..303
e-value: 6.0E-71
score: 240.4
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 69..286

TPS52
Sequences
Sequence
ATGGCTGCATTAGTGTCCACTGTAAGTAGTATTATTAGGTGGAATAGTAA
TAATAATAATACCTTCACTAGATCTGTGAAATCATGTTTAAGTTCAAATT
ACCATAATAATAATAATATTATTCATAATAAAACTGCATTAATGTCCACC
AATAATAATAATAATAATAATAATAATAATAATCAGAAGAGATCAGCAAA
CTATCAACCCCCACTTTGGCATTTTGACTATGTTCAATCACTTTCTACTC
CTTTCAAGGAAGGAGCATATGCCAAAAGAGTTGAGAAAGTAAAAGAAGAG
GTAAGAGTAATGGTGAAGAGAGCAAAAGAGGAGGAGAAGCCTTTATCTCA
ACTTGAGCTAATTGATGTAATGCAAAGACTTGGAATCTCTTACCACTTTG
AGAATGAAATTAATGACATATTGAAAGATATATATAACAACAATAATGTG
TGCAACACCAACAAAAATGTGTATGCCAATTCTCTTGAATTTAGACTCCT
AAGACAACATGGTTATCCAGTGTCTCAAGAAATTTTTAGTACGTGCAAAG
ATGAAAGAGGCAATTTTATGGTGTCTTCCAATGATATCAAAGGAATGTTA
TCTTTATATGAAGCTTCATTCTATTTGGTAGAAAATGAAGATGGTATTTT
GGAAGAGACAAGACACAAAACAAAGAAATATCTTGAGGAATACATAATCA
TGATCATGGAAAAACAACAATCATTATTAGATCAAAATAATAATAATAAT
GATAATGATTATGATTATGAACTAGTGAGCCATGCATTGGAGCTTCCACT
TCATTGGAGAATGTTAAGATTGGAGAGTAGGTGGTTTATTGATGTGTATG
AGAAGAGACTAGACATGAACCCTACTCTACTTACCTTAGCTAAACTAGAT
TTCAACATTGTCCAATCAACATACCAAGATGATCTTAAATATGTTTTCAG
GTGGTGGAAAAACACTGGTTTGGGAGAAAAGTTGAAATTTGCAAGAGATA
GAATGATGGTGAATTTTTTATGGACAATAGGAGTTTCATTTGAGCCACAC
TACAAAAGTTTAAGAAGAATGGCTACAAAAGTAAATGCTTTAATAACAAT
AATAGATGACATATATGATGTTTATGGTACACTTGATGAATTGGAGCTCT
TCACTAATGTGGTTGAGAGATGGGATGTTAGTGCTATGAATGGGCTCCCT
GAGTATATGAAGTCATGTTTCCTTGCTTTGCACAATTTTATAAATGACTT
TGCATTTGATGTGTTAAAAGGAAAAAGCCTCCATGTAAAAAAATACCTTC
AAAAAACGTGGGCAGATCTTTGTAAATCTTATTTAAGAGAAGCAAGATGG
TATTATGATGGATACACACCAAGATTTGAAGAGTACATTGAGAATGCATG
GATATCAATATCAGGACCTGTTATACTATCACATTTATACTTTTTTGTAG
TAAATCCAAACGAGGAAGATGCCTTATTAAGTACTTGCTTTAATGGATAC
CCTACCATAATACGCCATTCGTCGATGATTTTACGACTTACAAATGATCT
CGCCACTTCAACGGATGAGTTGAAAAGAGGTGATGTTCCCAAATCAATTC
AATGCAAAATGCATGAAGATCGTGTATGTGAAGAGAAAGCTCGTCAACAT
ATTAAGTTATTAATAAATGAAACATGGAAGTTTCTTAATAAAGATTGCAT
AAATTTGGATGATGATTACTCTCCAATGTTCTCTAAATCTAATAATAATA
TTAATAAGGCTTTCATTGAAATGTGTTTAAACCTTGGTAGAATGTCACAT
TGCATTTATCAATATGGAGATGGACATGGAATTCAAGATCGCCAAACAAA
AGATCATGTACTATCATTACTTATTCACCCTATTCTTCTTACCCAA
Sequence Length
1896
Sequence Checksum
6765e873bda85a6ce7f60233545e9434
Summary
Resource Type
mRNA
Organism
Name
TPS52
Identifier
TPS52
Time Accessioned
Friday, March 29, 2024 - 15:59
Time Last Modified
Friday, March 29, 2024 - 15:59