MK131289.1 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of MK131289.1 vs. Genbank
Match Name: CM010794.2
Description: Cannabis sativa cultivar Purple Kush chromosome 4, whole genome shotgun sequence

HSP 1 Score: 693.614 bits (375), Expect = 0.000e+0
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 1

Query:      443 ATATATTTGAGAAATTCAAAGATGAGAGTGGTAAGTTTAAGGAAAGCTTGAAAAGTGACATTGAAGGTATGCTTAGCTTGTATGAAGCTTCATACTTGAGCTATGTTGAAGAAAATATACTAGATGAGGCTCTTGCTTTCACTACCACCAATCTTAAGTTAGTGGCCAACAAAAAAGAACATCCATTATCACATGAAATATCCTTAGCCTTATATAGGCCTTTGAGAAAAACCCTAGTGAGGCTTTATGCTAGGCATTACATTTCAATCTATGAGAAACAACCTTCTCATAACAAAGTATTGCTACAATTTGCAAAGTTGGACTTCAATCTACTACAATCTTTGCATAAGAAGGAGCTTAGTGAAATTTCCAGGT 817
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   915161 ATATATTTGAGAAATTCAAAGATGAGAGTGGTAAGTTTAAGGAAAGCTTGAAAAGTGACATTGAAGGTATGCTTAGCTTGTATGAAGCTTCATACTTGAGCTATGTTGAAGAAAATATACTAGATGAGGCTCTTGCTTTCACTACCACCAATCTTAAGTTAGTGGCCAACAAAAAAGAACATCCATTATCACATGAAATATCCTTAGCCTTATATAGGCCTTTGAGAAAAACCCTAGTGAGGCTTTATGCTAGGCATTACATTTCAATCTATGAGAAACAACCTTCTCATAACAAAGTATTGCTACAATTTGCAAAGTTGGACTTCAATCTACTACAATCTTTGCATAAGAAGGAGCTTAGTGAAATTTCCAGGT 915535

HSP 2 Score: 575.428 bits (311), Expect = 9.040e-162
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 1

Query:      132 GGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATTCCATGGAAATAATAAAAGAAATATTATTAATGTTTCGAAACAATTAAAGTTAATTGATGATGTGGAACGTTTGGGATTATCTTATCATTTTGAAAGTGAAATAGAAAAAAAGCTACAACACATTTATGAAATTACTACCAATAATATTGATCATCAAGATCAACACTACTACTACTCCAACCATGATGAAGATCTACATGATGTCTCTATTCGATTTAGATTACTACGACAACATGGATTTAACATTTCATCTA 442
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   912814 GGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATTCCATGGAAATAATAAAAGAAATATTATTAATGTTTCGAAACAATTAAAGTTAATTGATGATGTGGAACGTTTGGGATTATCTTATCATTTTGAAAGTGAAATAGAAAAAAAGCTACAACACATTTATGAAATTACTACCAATAATATTGATCATCAAGATCAACACTACTACTACTCCAACCATGATGAAGATCTACATGATGTCTCTATTCGATTTAGATTACTACGACAACATGGATTTAACATTTCATCTA 913124

HSP 3 Score: 547.729 bits (296), Expect = 1.971e-153
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1

Query:     1421 AGTTCGAGCAAGAGAGGAATCACGTACCATCTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCATGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCAAGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTCTTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTATACACATGTTGGAAAATTGGTTAAGGACAGTGTTGCTGCGTTGCTTATAGATCCCATCCCATTATAG 1716
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   918652 AGTTCGAGCAAGAGAGGAATCACGTACCATCTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCATGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCAAGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTCTTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTATACACATGTTGGAAAATTGGTTAAGGACAGTGTTGCTGCGTTGCTTATAGATCCCATCCCATTATAG 918947

HSP 4 Score: 462.783 bits (250), Expect = 7.343e-128
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1

Query:     1173 GATGAAAAAATTAATACAAGCTTATTTCCATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCATTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCTCTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTCTCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCATGGATGACCTAGTTTCTCGTAAG 1422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   917243 GATGAAAAAATTAATACAAGCTTATTTCCATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCATTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCTCTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTCTCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCATGGATGACCTAGTTTCTCGTAAG 917492

HSP 5 Score: 418.463 bits (226), Expect = 1.612e-114
Identity = 231/233 (99.14%), Postives = 231/233 (99.14%), Query Frame = 1

Query:      814 AGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTG-GGACATAA 1045
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct:   916336 AGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTTTGGACATAA 916568

HSP 6 Score: 265.191 bits (143), Expect = 2.223e-68
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1

Query:     1031 TCAGGTGGGACATAAGTTTTATAGATAAACTTAGTCCAGATTATTTGAAGACATATTATAAGGTATTTTTGAATTCTTATGAAGAATGTGAAAAAGATCTTAAAAAGGAAGAGAGATACAAACTTCACTATGCAAAAGAATCG 1173
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   916852 TCAGGTGGGACATAAGTTTTATAGATAAACTTAGTCCAGATTATTTGAAGACATATTATAAGGTATTTTTGAATTCTTATGAAGAATGTGAAAAAGATCTTAAAAAGGAAGAGAGATACAAACTTCACTATGCAAAAGAATCG 916994

HSP 7 Score: 246.725 bits (133), Expect = 8.051e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1

Query:        1 ATGTCTAGTCAAGTGTTAGCTTCATCTCAAAAAAATGACAAAACACAAAACATCATTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   910743 ATGTCTAGTCAAGTGTTAGCTTCATCTCAAAAAAATGACAAAACACAAAACATCATTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 910875

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BLAST of MK131289.1 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 250.418 bits (135), Expect = 6.224e-64
Identity = 189/216 (87.50%), Postives = 189/216 (87.50%), Query Frame = 1

Query:      814 AGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATT 1029
                ||||||||||||||| ||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||| || || |||||||  || | ||  ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||
Sbjct: 54899051 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATT 54899266

HSP 2 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||| ||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct:  1769032 TCGTCCAACAACAAATTTTCACCCTTCTATTTGGGGCGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 1769108

HSP 3 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct:  1784623 TCGTCCAACAATAAAATTTCACCCTTCTATTTGGGGGGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 1784699

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BLAST of MK131289.1 vs. Genbank
Match Name: CM010799.2
Description: Cannabis sativa cultivar Purple Kush chromosome 7, whole genome shotgun sequence

HSP 1 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||| ||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22490236 TCGTCCAACAATAAAATTTCACCCTTCTATTTGGGGGGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 22490160

HSP 2 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||| ||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22509335 TCGTCCAACAACAAATTTTCACCCTTCTATTTGGGGCGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 22509259

HSP 3 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||| ||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 47132025 TCGTCCAACAACAAATTTTCACCCTTCTATTTGGGGCGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 47132101

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BLAST of MK131289.1 vs. Genbank
Match Name: CM010793.2
Description: Cannabis sativa cultivar Purple Kush chromosome 3, whole genome shotgun sequence

HSP 1 Score: 104.533 bits (56), Expect = 5.127e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||||||||||||||| ||||||||  | |||||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct: 42309727 TCGACCAACAACAAATTTTCACCCTTCTATTTGGGGCGACCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 42309651

HSP 2 Score: 100.839 bits (54), Expect = 6.633e-19
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 1

Query:       56 TTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||   ||| ||||||| ||||
Sbjct: 42338787 TTCGACCAACAACAAAATTTCACCCTTCTATTTGGGGAGATCGATTCCTCCATTACAATGCATCACAACAAGACTTGG 42338710


Match Name	Summary
CM010794.2	E-Value: 9.040e-162, PID: 100.00 Description: Cannabis sativa cultivar Purple Kush chromosome 4, whole genome shotgun sequence [more]
CM010792.2	E-Value: 6.224e-64, PID: 87.50 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]
CM010799.2	E-Value: 5.127e-20, PID: 90.91 Description: Cannabis sativa cultivar Purple Kush chromosome 7, whole genome shotgun sequence [more]
CM010793.2	E-Value: 5.127e-20, PID: 90.91 Description: Cannabis sativa cultivar Purple Kush chromosome 3, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of MK131289.1 vs. Genbank
Match Name: PKGMv1-57795_t
Description: No definition line

HSP 1 Score: 939.218 bits (508), Expect = 0.000e+0
Identity = 511/512 (99.80%), Postives = 511/512 (99.80%), Query Frame = 1

Query:     1171 TCG-ATGAAAAAATTAATACAAGCTTATTTCCATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCATTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCTCTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTCTCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCATGGATGACCTAGTTTCTCGTAAGTTCGAGCAAGAGAGGAATCACGTACCATCTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCATGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCAAGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTCTTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTATACACATGTTGGAAAATTGGTTAAGGACAGTG 1681
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:      258 TCGAATGAAAAAATTAATACAAGCTTATTTCCATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCATTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCTCTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTCTCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCATGGATGACCTAGTTTCTCGTAAGTTCGAGCAAGAGAGGAATCACGTACCATCTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCATGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCAAGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTCTTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTATACACATGTTGGAAAATTGGTTAAGGACAGTG 769

HSP 2 Score: 383.377 bits (207), Expect = 7.756e-105
Identity = 212/214 (99.07%), Postives = 212/214 (99.07%), Query Frame = 1

Query:      833 ACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTG-GGACATAA 1045
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct:       26 ACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTTTGGACATAA 239


Match Name	Summary
PKGMv1-57795_t	E-Value: 7.756e-105, PID: 99.80 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

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BLAST of MK131289.1 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 250.418 bits (135), Expect = 6.114e-64
Identity = 189/216 (87.50%), Postives = 189/216 (87.50%), Query Frame = 1

Query:      814 AGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATT 1029
                ||||||||||||||| ||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||| || || |||||||  || | ||  ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||
Sbjct: 21352992 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATT 21353207

HSP 2 Score: 110.073 bits (59), Expect = 1.083e-21
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 76676068 TCGCCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 76675992

HSP 3 Score: 110.073 bits (59), Expect = 1.083e-21
Identity = 71/77 (92.21%), Postives = 71/77 (92.21%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 76710699 TCGTCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 76710623

HSP 4 Score: 104.533 bits (56), Expect = 5.038e-20
Identity = 70/77 (90.91%), Postives = 70/77 (90.91%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                ||| ||||||||||| ||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 76692492 TCGTCCAACAACAAATTTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGG 76692416

HSP 5 Score: 100.839 bits (54), Expect = 6.516e-19
Identity = 70/78 (89.74%), Postives = 70/78 (89.74%), Query Frame = 1

Query:       56 TTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGG 133
                |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| | ||| ||||| | ||||
Sbjct: 76738579 TTCGACCAACAACAAAATTTCACCCTTCTATTTGGGGAGATCGATTCCTCCATTACAATGTATCACAACAACACTTGG 76738502


Match Name	Summary
NC_044377.1	E-Value: 6.114e-64, PID: 87.50 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

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BLAST of MK131289.1 vs. Genbank
Match Name: XM_030655054.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115725506), mRNA

HSP 1 Score: 918.905 bits (497), Expect = 0.000e+0
Identity = 1327/1724 (76.97%), Postives = 1327/1724 (76.97%), Query Frame = 1

Query:        1 ATGTC-TAGTCAAGTGTTAGCTTCATCTCAAAAAAATGACAAAACA-CAAAACATCATTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATTCCATGGAAATAATAAAAGAAATATTAT--TAATGTTTCGAAACAATTAAAGTTAATTGATGATGTGGAACGTTTGGGATTATCTTATCATTTTGAAAGTGAAATAGAAAAAAAGCTACAACACATTTATGAAATTACTACCAATAATATTGATCATCAAGATCAACACTACTACTACTCCAACCATGATGAAGATCTACATGATGTCTCTATTCGATTTAGATTACTACGACAACATGGATTTAACATTTCATCTAATATATTTGAGAAATTCAAAGATGAG-AGTGGTAAGTTTAAGGAAAGCTTGAAAAGTGACATTGAAGGTATGCTTAGCTTGTATGAAGCTTCATACTTGAGCTATGTTGAAGAAAATATACTAGATGAGGCTCTTGCTTTCACTACCACCAATCTT-A--AGTTAGTGGCCAACAAAAAAGAACATCCATTATCACATGAAATATCCTTAGCCTTATATAGGCCTTTGAGAAAAACCCTAGTGAGGCTTTATGCTAGGCATTACATTTCAATC-TATGAGAAACAA-CCTTCTCATAACAAAGTATTGCTACAATTTGCAAAGTTGGACTTCAATCTACTACAATCTTTGCATAAGAAGGAGCTTAGTGAAATTTCCAGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTGGGACATAAGTTTTATAGATAAACTTAGTCCAGATTATTTGAAGACATATTATAAGGTATTTTTGAATTCTTATGAAGAATGTGAAAAAGATCTTAAAAAGGAAGAGAGATACAAACTTCACTATGCAAAAGAATCGATGAAAAAATTAATACAAGCTTATTTCCATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCATTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCTCTTTTGTTGGAATGCAAGAT-GTTAAAACAAATCAAGTATTTGAATGGCTCTCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCATGGATGACCTAGTTTCTCGTAAGTTCGAGCAAGAGAGGAATCACGTACCATCTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCATGTGATGAGCTCAATAAA-CAAGTGGTTAATCTATGGAAAGAAATAAACCAAGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTA-TCTTAG-T-TAGAATTCTTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTATACACATGTTGGAAAATTGGTTAAGGACAGTGTTGCTGCGTTGCTTATAGATCCCATCCC 1709
                ||||| || |||||| ||||| |||||   | |||||||||||  | ||||| ||  |||| ||||||||||  | ||| ||  | |||||||| ||  |||| ||||| || | ||||||||| ||||| ||    |||||| ||   | |||||| ||||| || ||||| || |||| |||| ||||   |     |  |   || ||| ||||  |||||||||  |    || ||| || | ||||||||  ||||||||||||| || ||||||||||||| |||||||||||||  ||||||||||||||| ||   ||  | |      | | ||  ||   ||||| |  ||  | |   |||  | ||||||||| |||||||    ||||  || |||||| || | || |||||||||||||   ||||||||||||||||| | | ||| ||||||||| |  || || ||||||||  |||||| || |||||||   ||| |||| ||||| ||||| || ||| | || |||||| |||  || |||||| || |||| || ||||||||||| |||||  | ||| |  |||| |||   ||  |||||  ||||||||||||| ||||| |||   |||||||  | || ||| | ||||| | ||||| ||||||  | || ||||||||||||||| || || || ||||||   |||||||||||||  ||||||| || ||||||||||||| ||||||||| |||||| ||||||||  || ||||||||| ||||||||||||||||||||||| ||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||| || || |||||||  || | ||  ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||   ||||||||| ||| || |   ||| ||||| ||||||| | |||  |||||| |||||||||  |||| |||| ||||||||||| ||| |  || |||  |||||| || || |||||| || |||| |||| |||| ||||||||| |||| |   ||| ||||||  |||||| | ||||||| || ||||| ||||||| ||||| |||||||||||||| ||||||||  | |||| ||| ||| | ||| |||| | |||||||||  |||| ||| ||||| ||  || |||| ||||  ||||| |||||||| | | | || |||||  | |||| ||||| |||| ||| ||| |||||||||||| |||| |||| |||||| |||||| | ||  ||||   ||| ||||| || ||  | ||||||| ||||||||| || || ||||||||||||||||||||||| || ||| |||||| |||||  |||||||||||||||| |||  || || |||||  ||  | |||||| ||| | | |||  | | |  |||| |||||  | | |||  | ||  || |||||||||| |||||||||||||| ||| ||||||||  |   ||  | ||||||| |||||| ||||||||||  |||||
Sbjct:       58 ATGTCATA-TCAAGTTTTAGCCTCATC---ACAAAATGACAAAGTATCAAAA-ATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTTAGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATT---T-----T--T---AG-AATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGA---TA--A-C------ACT-AT--TC---ATCAA-A--AC--C-A---CAA--A-GATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATATATTTAAAATATTTAAAGATGAGCAAGGG-AATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCA-TCTTACGA-AAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCGATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAA-CAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCT-AAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTT-ATCCAGTTTTATCTCTTG--TTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCC 1724

[Close]

BLAST of MK131289.1 vs. Genbank
Match Name: XM_030622958.1
Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X2, mRNA

HSP 1 Score: 139.619 bits (75), Expect = 1.030e-31
Identity = 113/132 (85.61%), Postives = 113/132 (85.61%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATT 188
                ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||  |  ||| | | | ||||||||||||| | | ||||||| | ||||||||||||
Sbjct:      131 TCGTCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAAAGTTGAAGAATTAATACAAGTTGTAAAGAAAGAGATATT 262

[Close]

BLAST of MK131289.1 vs. Genbank
Match Name: XM_030622957.1
Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X1, mRNA

HSP 1 Score: 139.619 bits (75), Expect = 1.030e-31
Identity = 113/132 (85.61%), Postives = 113/132 (85.61%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATT 188
                ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||  |  ||| | | | ||||||||||||| | | ||||||| | ||||||||||||
Sbjct:      129 TCGTCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAAAGTTGAAGAATTAATACAAGTTGTAAAGAAAGAGATATT 260

[Close]

BLAST of MK131289.1 vs. Genbank
Match Name: XM_030622956.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695865), mRNA

HSP 1 Score: 134.079 bits (72), Expect = 4.792e-30
Identity = 112/132 (84.85%), Postives = 112/132 (84.85%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATT 188
                ||| ||||||||||| ||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||  |  ||| | | | ||||||||||||| | | ||||||| | ||||||||||||
Sbjct:       86 TCGTCCAACAACAAATTTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAAAGTTGAAGAATTAATACAAGTTGTGAAGAAAGAGATATT 217

[Close]

BLAST of MK131289.1 vs. Genbank
Match Name: XM_030622955.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115695864), mRNA

HSP 1 Score: 134.079 bits (72), Expect = 4.792e-30
Identity = 112/132 (84.85%), Postives = 112/132 (84.85%), Query Frame = 1

Query:       57 TCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGATTCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAAGTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATT 188
                ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||| ||||  |  ||| | | |  |||||||||||| | | ||||||| | ||||||||||||
Sbjct:      100 TCGCCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAGAGTTGAAGAATTAATACAAGTTGTAAAGAAAGAGATATT 231


Match Name	Summary
XM_030655054.1	E-Value: 0.000e+0, PID: 76.97 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115725506), mRNA [more]
XM_030622958.1	E-Value: 1.030e-31, PID: 85.61 Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X2, mRNA [more]
XM_030622957.1	E-Value: 1.030e-31, PID: 85.61 Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X1, mRNA [more]
XM_030622956.1	E-Value: 4.792e-30, PID: 84.85 Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695865), mRNA [more]
XM_030622955.1	E-Value: 4.792e-30, PID: 84.85 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115695864), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..73
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 5..27
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 4..569
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 4..569
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..66
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..17
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..53
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	TMHMM	TMhelix		coord: 12..34
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 249..514 e-value: 1.3E-107 score: 359.1
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 29..218 e-value: 3.0E-52 score: 177.1
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 29..553 e-value: 1.2E-192 score: 642.8
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 244..569
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 66..243 e-value: 1.2E-192 score: 642.8
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 26..244

Cannabis sativa isolate CsTPS16CC germacrene B synthase mRNA
complete cds

Reanalysis of 21 trichome RNA-Seq samples, FN-clones109 (TMM50 minvalue)

Reanalysis of 21 trichome RNA-Seq samples, PK-clones109 (TMM50 minvalue)

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGTCTAGTCAAGTGTTAGCTTCATCTCAAAAAAATGACAAAACACAAAA CATCATTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGAT TCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAA GTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATTCCATGGAAATAA TAAAAGAAATATTATTAATGTTTCGAAACAATTAAAGTTAATTGATGATG TGGAACGTTTGGGATTATCTTATCATTTTGAAAGTGAAATAGAAAAAAAG CTACAACACATTTATGAAATTACTACCAATAATATTGATCATCAAGATCA ACACTACTACTACTCCAACCATGATGAAGATCTACATGATGTCTCTATTC GATTTAGATTACTACGACAACATGGATTTAACATTTCATCTAATATATTT GAGAAATTCAAAGATGAGAGTGGTAAGTTTAAGGAAAGCTTGAAAAGTGA CATTGAAGGTATGCTTAGCTTGTATGAAGCTTCATACTTGAGCTATGTTG AAGAAAATATACTAGATGAGGCTCTTGCTTTCACTACCACCAATCTTAAG TTAGTGGCCAACAAAAAAGAACATCCATTATCACATGAAATATCCTTAGC CTTATATAGGCCTTTGAGAAAAACCCTAGTGAGGCTTTATGCTAGGCATT ACATTTCAATCTATGAGAAACAACCTTCTCATAACAAAGTATTGCTACAA TTTGCAAAGTTGGACTTCAATCTACTACAATCTTTGCATAAGAAGGAGCT TAGTGAAATTTCCAGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTAC CATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTC TTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCAT TTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTG AAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTGGGACATAAGTTTT ATAGATAAACTTAGTCCAGATTATTTGAAGACATATTATAAGGTATTTTT GAATTCTTATGAAGAATGTGAAAAAGATCTTAAAAAGGAAGAGAGATACA AACTTCACTATGCAAAAGAATCGATGAAAAAATTAATACAAGCTTATTTC CATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCA TTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCT CTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTC TCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCAT GGATGACCTAGTTTCTCGTAAGTTCGAGCAAGAGAGGAATCACGTACCAT CTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCA TGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCA AGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTC TTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTAT ACACATGTTGGAAAATTGGTTAAGGACAGTGTTGCTGCGTTGCTTATAGA TCCCATCCCATTATAG
Sequence Length	1716
Sequence Checksum	a8f5449ba7073f0923d949d09bf8cb42

Sequence

ATGTCTAGTCAAGTGTTAGCTTCATCTCAAAAAAATGACAAAACACAAAA
CATCATTCGACCAACAACAAAATTTCACCCACCAATTTGGGGAGATCGAT
TCCTCCATTACAATATTTCAGAACAAGAGTTGGAATATAAAGAGGGACAA
GTTGAAGAATTGAAAGAAGTTGTTAGGAAAGAGATATTCCATGGAAATAA
TAAAAGAAATATTATTAATGTTTCGAAACAATTAAAGTTAATTGATGATG
TGGAACGTTTGGGATTATCTTATCATTTTGAAAGTGAAATAGAAAAAAAG
CTACAACACATTTATGAAATTACTACCAATAATATTGATCATCAAGATCA
ACACTACTACTACTCCAACCATGATGAAGATCTACATGATGTCTCTATTC
GATTTAGATTACTACGACAACATGGATTTAACATTTCATCTAATATATTT
GAGAAATTCAAAGATGAGAGTGGTAAGTTTAAGGAAAGCTTGAAAAGTGA
CATTGAAGGTATGCTTAGCTTGTATGAAGCTTCATACTTGAGCTATGTTG
AAGAAAATATACTAGATGAGGCTCTTGCTTTCACTACCACCAATCTTAAG
TTAGTGGCCAACAAAAAAGAACATCCATTATCACATGAAATATCCTTAGC
CTTATATAGGCCTTTGAGAAAAACCCTAGTGAGGCTTTATGCTAGGCATT
ACATTTCAATCTATGAGAAACAACCTTCTCATAACAAAGTATTGCTACAA
TTTGCAAAGTTGGACTTCAATCTACTACAATCTTTGCATAAGAAGGAGCT
TAGTGAAATTTCCAGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTAC
CATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTC
TTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCAT
TTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTG
AAGAACTTGAGCTCCTCACCGAAGCAATTCTCAGGTGGGACATAAGTTTT
ATAGATAAACTTAGTCCAGATTATTTGAAGACATATTATAAGGTATTTTT
GAATTCTTATGAAGAATGTGAAAAAGATCTTAAAAAGGAAGAGAGATACA
AACTTCACTATGCAAAAGAATCGATGAAAAAATTAATACAAGCTTATTTC
CATGAAGCACAATGGTTGAACCAAGGACATTTCCCAAGCTTTGATGAGCA
TTTGAAAGTTTCTTTTGTGTCTTCTGGTTACCCAATGTTGATTGAGACCT
CTTTTGTTGGAATGCAAGATGTTAAAACAAATCAAGTATTTGAATGGCTC
TCTACACAACCAAAGATTTTTAGAGCTTGCACTATCATTTCTAGATTCAT
GGATGACCTAGTTTCTCGTAAGTTCGAGCAAGAGAGGAATCACGTACCAT
CTACAGTAGATTGCTACATGAAGCAATATGGTGTATCGGAACAAGAGGCA
TGTGATGAGCTCAATAAACAAGTGGTTAATCTATGGAAAGAAATAAACCA
AGAGTTTCTTAGGCCAACTTCTATGCCTTCATCTATCTTAGTTAGAATTC
TTAATTTCACAAAAGTGCTTGACATTATCTACAAAGAAGGTGATGGCTAT
ACACATGTTGGAAAATTGGTTAAGGACAGTGTTGCTGCGTTGCTTATAGA
TCCCATCCCATTATAG

Sequence Length

1716

Sequence Checksum

a8f5449ba7073f0923d949d09bf8cb42

Summary

Resource Type	mRNA
Accession	MK131289.1
Organism	Cannabis sativa L.
Name	MK131289.1
Identifier	MK131289.1
Time Accessioned	Tuesday, November 4, 2025 - 02:15
Time Last Modified	Tuesday, November 4, 2025 - 02:15