KY014564.1 | ICGRC

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Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR001906	Terpene_synth_N
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

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BLAST of KY014564.1 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 699.154 bits (378), Expect = 0.000e+0
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1

Query:      398 ATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGT 775
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54898585 ATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGT 54898962

HSP 2 Score: 536.649 bits (290), Expect = 4.152e-150
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1

Query:     1379 AGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCATGA 1671
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 54899972 AGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCGTGA 54900264

HSP 3 Score: 497.869 bits (269), Expect = 1.959e-138
Identity = 275/278 (98.92%), Postives = 275/278 (98.92%), Query Frame = 1

Query:      130 AGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATATATTTAA 407
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||
Sbjct: 54896760 AGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAGTAAGTTTAA 54897037

HSP 4 Score: 462.783 bits (250), Expect = 7.147e-128
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 1

Query:     1128 AGC-GATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAG 1380
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54899630 AGCAGATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAG 54899883

HSP 5 Score: 412.923 bits (223), Expect = 7.301e-113
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1

Query:      772 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGT 994
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54899051 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGT 54899273

HSP 6 Score: 263.345 bits (142), Expect = 7.781e-68
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:      990 TAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCG 1131
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54899398 TAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCG 54899539

HSP 7 Score: 239.338 bits (129), Expect = 1.311e-60
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1

Query:        1 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTT 129
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54894188 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTT 54894316

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BLAST of KY014564.1 vs. Genbank
Match Name: CM010794.2
Description: Cannabis sativa cultivar Purple Kush chromosome 4, whole genome shotgun sequence

HSP 1 Score: 250.418 bits (135), Expect = 6.058e-64
Identity = 189/216 (87.50%), Postives = 189/216 (87.50%), Query Frame = 1

Query:      772 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATT 987
                ||||||||||||||| ||||||| | | |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||| || || |||||||  || | ||  ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||
Sbjct:   916336 AGGTGGTGGAAAGAATTAGACTTGGCAAACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATT 916551


Match Name	Summary
CM010792.2	E-Value: 4.152e-150, PID: 100.00 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]
CM010794.2	E-Value: 6.058e-64, PID: 87.50 Description: Cannabis sativa cultivar Purple Kush chromosome 4, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of KY014564.1 vs. Genbank
Match Name: PKGMv1-32363_t
Description: No definition line

HSP 1 Score: 992.771 bits (537), Expect = 0.000e+0
Identity = 539/540 (99.81%), Postives = 539/540 (99.81%), Query Frame = 1

Query:     1132 ATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCATGA 1671
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:        1 ATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCGTGA 540

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BLAST of KY014564.1 vs. Genbank
Match Name: PKGMv1-57795_t
Description: No definition line

HSP 1 Score: 220.872 bits (119), Expect = 6.264e-56
Identity = 165/188 (87.77%), Postives = 165/188 (87.77%), Query Frame = 1

Query:      800 ACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATT 987
                |||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||| |||| || || |||||||  || | ||  ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| |||||
Sbjct:       35 ACAAACTACCATTTGCAAGAAATAGGATTGTGGAGCTATACCTTTGGATACTAGGAGTCTTTCATGAACCTCAATTCTCTCTTGCAAGAAAAATCTTAATTAAAGCCATTTCAATGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAACTTGAGCTCCTCACCGAAGCAATT 222


Match Name	Summary
PKGMv1-32363_t	E-Value: 0.000e+0, PID: 99.81 Description: No definition line [more]
PKGMv1-57795_t	E-Value: 6.264e-56, PID: 87.77 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
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BLAST of KY014564.1 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 699.154 bits (378), Expect = 0.000e+0
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1

Query:      398 ATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGT 775
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21352512 ATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGT 21352889

HSP 2 Score: 536.649 bits (290), Expect = 4.079e-150
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1

Query:     1379 AGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCATGA 1671
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21353913 AGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCGTGA 21354205

HSP 3 Score: 497.869 bits (269), Expect = 1.925e-138
Identity = 275/278 (98.92%), Postives = 275/278 (98.92%), Query Frame = 1

Query:      130 AGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATATATTTAA 407
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||
Sbjct: 21350681 AGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAGTAAGTTTAA 21350958

HSP 4 Score: 462.783 bits (250), Expect = 7.022e-128
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 1

Query:     1128 AGC-GATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAG 1380
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21353571 AGCAGATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAG 21353824

HSP 5 Score: 412.923 bits (223), Expect = 7.173e-113
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1

Query:      772 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGT 994
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21352992 AGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGT 21353214

HSP 6 Score: 263.345 bits (142), Expect = 7.644e-68
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:      990 TAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCG 1131
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21353339 TAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCG 21353480

HSP 7 Score: 239.338 bits (129), Expect = 1.288e-60
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1

Query:        1 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTT 129
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21348087 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTT 21348215


Match Name	Summary
NC_044377.1	E-Value: 4.079e-150, PID: 100.00 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

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BLAST of KY014564.1 vs. Genbank
Match Name: XM_030655054.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115725506), mRNA

HSP 1 Score: 3081.33 bits (1668), Expect = 0.000e+0
Identity = 1670/1671 (99.94%), Postives = 1670/1671 (99.94%), Query Frame = 1

Query:        1 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTTAGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCGATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCATGA 1671
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct:       58 ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAATTGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTCTCCAATATAGTATTTCAGACCAAGACTTTAGCTATAAAAAGCAGCGAGTTGACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGATAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGATTGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTACGATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTCTACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATATATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATAACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTATATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACCTTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTATTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGCCAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACATTGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGAAAAGAGCTTAGTCAAATTTCCAGGTGGTGGAAAGAAATAGACTTTGTACACAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTATTAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACAAAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGGTACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGTGGGACTTAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAGGTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGAAAGTTACAAAGTTTACTACGCAAGAGAAGCGATGAAAAGATTACTTGGAGCATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTCGATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGATAGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTGAGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGTAGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCATTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAACAAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAAATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATCTCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTGATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTACTTATAGATCAAATCCCGTGA 1728


Match Name	Summary
XM_030655054.1	E-Value: 0.000e+0, PID: 99.94 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115725506), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..43
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..56
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..56
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..85
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 7..555
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 7..555
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 28..539 e-value: 1.2E-190 score: 636.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 230..554
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 66..229 e-value: 1.2E-190 score: 636.2
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 235..500 e-value: 3.2E-106 score: 354.5
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 28..204 e-value: 1.5E-52 score: 178.1
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 25..227

Cannabis sativa isolate Finola_TPS4 terpene synthase mRNA
complete cds

Reanalysis of 21 trichome RNA-Seq samples, FN-clones109 (TMM50 minvalue)

Reanalysis of 21 trichome RNA-Seq samples, PK-clones109 (TMM50 minvalue)

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAAT TGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTC TCCAATATAGTATTTCAGACCAAGACTTTAGCTATAAAAAGCAGCGAGTT GACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGA TAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGAT TGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTAC GATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTC TACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATA TATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATA ACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTA TATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACC TTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTA TTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGC CAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACAT TGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGA AAAGAGCTTAGTCAAATTTCCAGGTGGTGGAAAGAAATAGACTTTGTACA CAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTAT TAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACA AAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGG TACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGTGGGACT TAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAG GTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGA AAGTTACAAAGTTTACTACGCAAGAGAAGCGATGAAAAGATTACTTGGAG CATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTC GATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGAT AGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTG AGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGT AGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCA TTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAAC AAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAA ATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATC TCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTG ATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTA CTTATAGATCAAATCCCATGA
Sequence Length	1671
Sequence Checksum	9cf22203f1dc0ec29b8a21f9dc1b9dd5

Sequence

ATGTCATATCAAGTTTTAGCCTCATCACAAAATGACAAAGTATCAAAAAT
TGTTCGTCCAACAACAACTTATCAACCTTCTATTTGGGGGGAGAGATTTC
TCCAATATAGTATTTCAGACCAAGACTTTAGCTATAAAAAGCAGCGAGTT
GACGAATTAAAGGAAGTGGTAAGGAGAGAGGTATTTTTAGAATGTTATGA
TAATGTTTCATATGTGTTGAAGATAGTGGATGATGTTCAACGTTTGGGAT
TGTCGTATCATTTTGAAAATGAAATAGAAAAAGCGCTACAACACATTTAC
GATAACACTATTCATCAAAACCACAAAGATGAAGATTTACATGACACTTC
TACCCGCTTTAGACTATTGCGCCAACATGGATTTATGGTTTCATCTAATA
TATTTAAAATATTTAAAGATGAGCAAGGGAATTTTAAGGAGTGCTTGATA
ACTGACATTCTTGGTTTGCTGAGCTTATATGAGGCCTCACATTTAAGCTA
TATTGGCGAGAATATATTAAATGAAGCACTTGCTTTCACCACCACTCACC
TTCATCAGTTTGTGAAAAATGAAAAAACACATCCATTATCAAATGAAGTA
TTACTAGCCTTGCAGAGACCTATAAGAAAGAGCCTAGAGAGGCTCCACGC
CAGGCATTACATTTCATCTTACGAAAACAAGATTTCTCATAACAAAACAT
TGCTAGAACTTGCAAAGTTGGATTTCAATCTATTACAATGTTTGCATAGA
AAAGAGCTTAGTCAAATTTCCAGGTGGTGGAAAGAAATAGACTTTGTACA
CAAACTACCTTTTGCAAGAGATAGGATTGTGGAGCTATACCTTTGGCTAT
TAGGAGTTTTTCATGAACCTGAATTGTCACTGGCAAGAATTATTTCAACA
AAAGTTATTGCATTGGCCTCAGTTGCAGATGATATTTATGATGCATATGG
TACATTTGAAGAGCTTGAGCTCCTTACTGAATCAATTAATAGGTGGGACT
TAAATTGTGCGGATCAACTTCGTCCAGAATGTTTACAGACATTTTATAAG
GTTCTTTTAAATTGTTATGAAGAATTTGAGAGTGAGCTTGGAAAGGAGGA
AAGTTACAAAGTTTACTACGCAAGAGAAGCGATGAAAAGATTACTTGGAG
CATATTTCAGTGAAGCTCGATGGTTGCACGAAGGATATTTCCCTAGCTTC
GATGAGCATTTGAAGGTTTCTTTGATTTCTTGTGGATACACCATGATGAT
AGTGACCTCTTTAATTGGCATGAAAGATTGTGTAACAAAGCAAGATTTTG
AGTGGCTCTCAAAAGACCCCAAGATAATGAGAGATTGCAATATCCTTTGT
AGGTTCATGGATGACATAGTCTCTCATAAGTTTGAGCAACAAAGAGATCA
TTCACCGTCTACCGTTGAGAGTTACATGAGGCAATATGGGGTGTCAGAAC
AAGAGGCATGTGATGAGCTAAGAAAGCAAGTGATTAATTCATGGAAAGAA
ATAAACAAAGCATTCCTCAGGCCTTCTAATGTGCCTTATCCAGTTTTATC
TCTTGTTCTCAATTTTTCGAGAGTAATGGATCTTCTCTACAAAGATGGTG
ATGGCTATACGCATATTGGAAAAGAGACAAAAAATAGTGTTGTTGCGTTA
CTTATAGATCAAATCCCATGA

Sequence Length

1671

Sequence Checksum

9cf22203f1dc0ec29b8a21f9dc1b9dd5

Summary

Resource Type	mRNA
Accession	KY014564.1
Organism	Cannabis sativa L.
Name	KY014564.1
Identifier	KY014564.1
Time Accessioned	Tuesday, November 4, 2025 - 02:29
Time Last Modified	Tuesday, November 4, 2025 - 02:29