KY014555.1 | ICGRC

Annotations

Contact

Cross Reference

Location on Map

Properties

Relationship

Publication

Sequences

Summary

Annotations

This record has the following annotations.
Term	Name	Definition
GO:0000287	magnesium ion binding	Interacting selectively and non-covalently with magnesium (Mg) ions. [GOC:ai]
GO:0016829	lyase activity
GO:0010333	terpene synthase activity	Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units. [EC:4.2.3.-, GOC:tair_curators]
INTERPRO:IPR008930	Terpenoid_cyclase/PrenylTrfase
INTERPRO:IPR036965	Terpene_synth_N_sf
INTERPRO:IPR008949	Isoprenoid_synthase_dom_sf
INTERPRO:IPR005630	Terpene_synthase_metal-bd
INTERPRO:IPR001906	Terpene_synth_N

Click a tab below to view blast alignments.

blastn of TPS CDS against pkv5 genome

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: AGQN03004425.1
Description: Cannabis sativa cultivar Purple Kush 004429F, whole genome shotgun sequence

HSP 1 Score: 730.547 bits (395), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 802
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    66427 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 66033

HSP 2 Score: 536.649 bits (290), Expect = 4.236e-150
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:    63224 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 62932

HSP 3 Score: 436.93 bits (236), Expect = 4.419e-120
Identity = 250/256 (97.66%), Postives = 250/256 (97.66%), Query Frame = 1

Query:     1158 GTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAG 1413
                ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    64204 GTTTAAAAGATTATTAAGAGGTTATTTTGAGGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGT-GATGGCTTGCTCTTTA--TGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAG 63952

HSP 4 Score: 407.383 bits (220), Expect = 3.465e-111
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    65929 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTATACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 65707

HSP 5 Score: 385.223 bits (208), Expect = 1.624e-104
Identity = 218/223 (97.76%), Postives = 218/223 (97.76%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct:     8804 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTATACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCCCTTGCCTCAATTGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGACAGGT 8582

HSP 6 Score: 261.498 bits (141), Expect = 2.855e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 1158
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    65415 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 65275

HSP 7 Score: 228.258 bits (123), Expect = 2.895e-57
Identity = 135/141 (95.74%), Postives = 135/141 (95.74%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 1158
                ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct:     8264 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATAATTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAAGAATTTGAACAAGGGTTTGAAAATGAGGAAACTTACAGAGTTTACTATGCAAAAGAAACG 8124

HSP 8 Score: 195.019 bits (105), Expect = 2.937e-47
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1

Query:      682 TATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAA-----GTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 802
                ||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:     9032 TATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAATTAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCTTGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 8907

HSP 9 Score: 150.699 bits (81), Expect = 6.447e-34
Identity = 153/188 (81.38%), Postives = 153/188 (81.38%), Query Frame = 1

Query:     1175 AAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 1359
                |||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| |  | |||||| || |||||||  |   |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct:    10715 AAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 10528

HSP 10 Score: 147.006 bits (79), Expect = 8.340e-33
Identity = 155/191 (81.15%), Postives = 155/191 (81.15%), Query Frame = 1

Query:     1175 AAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGA-TG-GCT-TGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 1359
                |||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| |  | |||||| || |||||||  | | |  |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct:    35978 AAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCATTTGTGGTTACTT-ATGTTGACAGTGATCAGCTCTTTAATTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 35789

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: AGQN03002522.1
Description: Cannabis sativa cultivar Purple Kush 002526F, whole genome shotgun sequence

HSP 1 Score: 723.16 bits (391), Expect = 0.000e+0
Identity = 394/395 (99.75%), Postives = 394/395 (99.75%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 802
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   105179 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACA-CCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 105572

HSP 2 Score: 536.649 bits (290), Expect = 4.236e-150
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:   108368 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 108660

HSP 3 Score: 481.249 bits (260), Expect = 2.013e-133
Identity = 272/278 (97.84%), Postives = 272/278 (97.84%), Query Frame = 1

Query:      132 GAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 409
                |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    98458 GAATTATAAACAAGGCCAAGTTGAAGAATTGAAAAAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAGTAATCGATTGAAGTTAATTGATGTGGTGCAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 98735

HSP 4 Score: 451.703 bits (244), Expect = 1.578e-124
Identity = 252/256 (98.44%), Postives = 252/256 (98.44%), Query Frame = 1

Query:     1158 GTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAG 1413
                ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   107381 GTTTAAAAGATTATTAAGAGGTTATTTTGAGGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTGGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAG 107636

HSP 5 Score: 407.383 bits (220), Expect = 3.465e-111
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   105676 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTATACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 105898

HSP 6 Score: 261.498 bits (141), Expect = 2.855e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 1158
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   106190 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 106330

HSP 7 Score: 217.178 bits (117), Expect = 6.267e-54
Identity = 127/132 (96.21%), Postives = 127/132 (96.21%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 132
                |||||  |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    98042 ATGTCGTCTCAAATCTTAGCAACCTCATCCAAAAATTACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 98173

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: AGQN03007528.1
Description: Cannabis sativa cultivar Purple Kush 007533F, whole genome shotgun sequence

HSP 1 Score: 514.489 bits (278), Expect = 1.985e-143
Identity = 288/293 (98.29%), Postives = 288/293 (98.29%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:    16886 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGCGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAATGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 16594

HSP 2 Score: 462.783 bits (250), Expect = 7.291e-128
Identity = 268/276 (97.10%), Postives = 268/276 (97.10%), Query Frame = 1

Query:      134 ATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 409
                |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     3069 ATTATAAACAAGGCCAAGTTGAAGAATTGAAA-AAGTGGTAAGAAAGGAGATATTTGGAGAATT--TATGTGATGATTGGA-TAATCGATTGAAGTTAATTGATGTGGTGCAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 2798

HSP 3 Score: 222.718 bits (120), Expect = 1.347e-55
Identity = 128/132 (96.97%), Postives = 128/132 (96.97%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 132
                |||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     3484 ATGTCGTCTCAAATCTTAGCAACCTCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 3353

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: CM010792.2
Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence

HSP 1 Score: 484.943 bits (262), Expect = 1.556e-134
Identity = 347/388 (89.43%), Postives = 347/388 (89.43%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 72025061 AGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGCTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---TGAAGAAAAAAGAACACCATGAAGATGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAATTAGATTTTAATCTATTACAATGCATGCACAAAAAGGAGCTTAGTGAA 72025445

HSP 2 Score: 451.703 bits (244), Expect = 1.578e-124
Identity = 341/388 (87.89%), Postives = 341/388 (87.89%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC-CCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||| ||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||| |||| || |||||||   | |  ||||||||| |||   |  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 72051752 AGATATATTTGAAAAATTCAAAGACGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAGGCTACACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACTTAACCGAGTTTTTGG--CA-AGGAAAAAAGAATACCATGATGACGATGATCCATTATCAAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTTCATGCAAGGCATTTTATTTCGATATATGAAAAAGATGATTCACATAACAAAGTATTGTTACAACTTGCAAAATTAGATTTCAATCTATTACAATGCATGCACAAAAAGGAGCTTAGTGAA 72052136

HSP 3 Score: 451.703 bits (244), Expect = 1.578e-124
Identity = 343/391 (87.72%), Postives = 343/391 (87.72%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC-CCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATC 795
                |||||||||| | || |||||||||||| |||||||||||||| |||||||||  ||||| ||  |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | ||| ||||  || |||||||     || ||||||||||||| | |  | |||||||||||||| || ||||||| ||| |||||||||||||||||| ||||||||||||| ||||| ||| | | | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 72111024 AGATATATTTAAAAAATTCAAAGATGAGGATGGCAACTTTAAAAAATGTTTGGTAAGTGATACTCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACAACTAAAAGAGTTTTTGG---CGAAGAAAAAAGAACACCACGATGACGATGATCCATTATCGAAAGAAATATATCGTGCCCTAGAGAGGCCCTTACGAAAGACCCTAGTAAATCTTCATACTAAGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTTAATCTATTACAATCCCTGCACAAAAAGGAGCTTAGTGAAATC 72110637

HSP 4 Score: 224.565 bits (121), Expect = 3.745e-56
Identity = 189/223 (84.75%), Postives = 189/223 (84.75%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||  |||||||||| |||||||||||||||||| ||||||| | ||||||||||| | | ||||| | | |||||||||| ||||
Sbjct: 72110059 AGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTGTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAATATTTTAGTCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGAACATTTGAAGAACTTGAACTCCTAACTCAAGCAATTGAAAGGT 72109837

HSP 5 Score: 189.479 bits (102), Expect = 1.366e-45
Identity = 194/240 (80.83%), Postives = 194/240 (80.83%), Query Frame = 1

Query:     1459 ATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATT 1698
                |||| |||| ||||||| |  ||||||||||| | ||||||| | |||| ||   |   || |||||||||||||||||| ||||||||| | || |||||| ||  ||||||| | |||||| || | | ||| ||| || |||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||| |||||||  |||||||  ||| | |||||||| |||
Sbjct: 72108291 ATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAATTTAATAAGCTTATAAATAATGCATGGAAAGAAATAAATGAAGAGTTTGTGAAGCCAACTAAATTAGCTTCATCCATATTACTTAGGGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGATACTGTTGCTGCTTTGTTAATTGATCCCATT 72108052

HSP 6 Score: 180.245 bits (97), Expect = 8.223e-43
Identity = 142/164 (86.59%), Postives = 142/164 (86.59%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAA 313
                |||||  |||| ||||||||||| ||||  || ||||||||||| || ||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||  ||||||||||||||
Sbjct: 72023131 GTTGAGAAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 72023293

HSP 7 Score: 154.392 bits (83), Expect = 4.984e-35
Identity = 169/210 (80.48%), Postives = 169/210 (80.48%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||  | |  |||| || ||||||||||  |  |||  |||| ||  ||  ||  | ||   ||||||||||| |||  |  || |||||||||||||||||||||||| |||||||||||
Sbjct: 72111723 CTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATATTTTTGAT-CTTCTT--AAGGAAGA---TTTGCATGATGTTTCCTTGTGGGTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 72111520

HSP 8 Score: 137.772 bits (74), Expect = 5.019e-30
Identity = 98/110 (89.09%), Postives = 98/110 (89.09%), Query Frame = 1

Query:      204 TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAA 313
                ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| ||||| ||||||||  ||||||||||||||
Sbjct: 72050758 TGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 72050867

HSP 9 Score: 93.4528 bits (50), Expect = 1.102e-16
Identity = 75/87 (86.21%), Postives = 75/87 (86.21%), Query Frame = 1

Query:     1162 AAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTC 1247
                ||||| |||||| | || ||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||||||
Sbjct:  1772430 AAAAGAATTATT-AGAGCTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTC 1772515

HSP 10 Score: 89.7595 bits (48), Expect = 1.426e-15
Identity = 64/72 (88.89%), Postives = 64/72 (88.89%), Query Frame = 1

Query:     1176 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTC 1247
                |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||||||
Sbjct:  1788709 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTC 1788780

HSP 11 Score: 62.0597 bits (33), Expect = 3.108e-7
Identity = 55/66 (83.33%), Postives = 55/66 (83.33%), Query Frame = 1

Query:      341 ATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||||  ||| ||  ||| |||| | |||||||||||||||||||||||||||| |||  ||||||
Sbjct: 72050880 ATGAAGATTTACACCATGTTTCTTTACGGTTTAGACTTCTACGACAACATGGATTTAGAATTTCTT 72050945

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: CM010796.2
Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence

HSP 1 Score: 479.403 bits (259), Expect = 7.240e-133
Identity = 346/388 (89.18%), Postives = 346/388 (89.18%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 52164440 AGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGCTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATGAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAATTAGATTTTAATCTATTACAATGCATGCACAAAAAGGAGCTTAGTGAA 52164824

HSP 2 Score: 453.549 bits (245), Expect = 4.388e-125
Identity = 342/388 (88.14%), Postives = 342/388 (88.14%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | | |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||||| |||||||||
Sbjct: 52205744 AGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATAAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTACGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAGTTAGATTTT--TCTATTACAAT-CATGCACAAAAAGGA-CTTAGTGAA 52205364

HSP 3 Score: 446.163 bits (241), Expect = 7.343e-123
Identity = 342/391 (87.47%), Postives = 342/391 (87.47%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC-CCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATC 795
                |||||||||| | || |||||||||||| |||| ||||||||| |||||||||  ||||| ||  |||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||   |  | |||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| | | | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 52215615 AGATATATTTAAAAAATTCAAAGATGAGGATGGAAACTTTAAAAAATGTTTGGTAAGTGATACTCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGGTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATGATGACGATGATCCATTATCGAAAGAAATATATCGTGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTTCATACTAAGCATTTCATTTCGATATACGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTTAATCTATTACAATCCCTACACAAAAAGGAGCTTAGTGAAATC 52215228

HSP 4 Score: 224.565 bits (121), Expect = 3.745e-56
Identity = 189/223 (84.75%), Postives = 189/223 (84.75%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||  |||||||||| |||||||||||||||||| ||||||| | ||||||||||| | | ||||| | | |||||||||| ||||
Sbjct: 52214642 AGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAATATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGAACATTTGAAGAACTTGAACTCCTAACTCAAGCAATTGAAAGGT 52214420

HSP 5 Score: 211.638 bits (114), Expect = 2.916e-52
Identity = 198/240 (82.50%), Postives = 198/240 (82.50%), Query Frame = 1

Query:     1459 ATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATT 1698
                |||| |||| ||||||| |  ||||||||||| | ||||||| | |||| ||   |  ||| |||||||||||||||||| ||||||||| | || |||||| ||  ||||||||| |||||| |||||| ||| ||| || |||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||| ||||||   |||||||  ||||| |||||||| |||
Sbjct: 52211354 ATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAACTCAATAAGCTTATAATTAATGCATGGAAAGAAATAAATGAAGAGTTTTTGAAGCCAACTAAATTAGCTTCACCCATATTACTTCGTGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGATTCTGTTGCTGCTTTGCTAATTGATCCCATT 52211115

HSP 6 Score: 191.325 bits (103), Expect = 3.799e-46
Identity = 144/164 (87.80%), Postives = 144/164 (87.80%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAA 313
                ||||| ||||| ||||||||||| ||||  || ||||||||||| || ||| | ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||  ||||||||||||||
Sbjct: 52162564 GTTGAGGAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGCTTGGAAAAATCAATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAA 52162726

HSP 7 Score: 163.625 bits (88), Expect = 8.281e-38
Identity = 171/211 (81.04%), Postives = 171/211 (81.04%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAAT-AAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||  | |  |||| || ||||||||||  ||  |||  |||| ||  ||  ||  |||||   |||||||||| |||  |  || |||||||||||||||||||||||| |||||||||||
Sbjct: 52216328 CTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAATTT-TGAT-CTTCTT--AAGGATGAAGAGTTGCATGATGTTTCCTTGTGGGTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 52216122

HSP 8 Score: 108.226 bits (58), Expect = 3.936e-21
Identity = 81/92 (88.04%), Postives = 81/92 (88.04%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAAT 288
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||
Sbjct: 52206605 CTTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAAT 52206514

HSP 9 Score: 67.5997 bits (36), Expect = 6.679e-9
Identity = 56/66 (84.85%), Postives = 56/66 (84.85%), Query Frame = 1

Query:      341 ATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||||  ||| ||| ||| ||||  ||||||||||||||||||||||||||||| |||  ||||||
Sbjct: 52206476 ATGAAGATTTACATCATGTTTCTGATCGGTTTAGACTTCTACGACAACATGGATTTAGAATTTCTT 52206411

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: AGQN03002427.1
Description: Cannabis sativa cultivar Purple Kush 002431F, whole genome shotgun sequence

HSP 1 Score: 411.077 bits (222), Expect = 2.679e-112
Identity = 273/296 (92.23%), Postives = 273/296 (92.23%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCT-A--TATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |  || || || ||  || | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct:   110894 AGAATGAGCAAGAGAGAAATCATGTACTATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAAAAGAAGAAGCATGTGATGAAAGGAATAGGCGAGTGGTTATTTCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACTTCACCTA-TA-TTAGT--TC-G-ATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 110605

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: CM010799.2
Description: Cannabis sativa cultivar Purple Kush chromosome 7, whole genome shotgun sequence

HSP 1 Score: 110.073 bits (59), Expect = 1.094e-21
Identity = 98/117 (83.76%), Postives = 98/117 (83.76%), Query Frame = 1

Query:     1162 AAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGAT 1277
                ||||| |||||| | || ||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||| | |||||| |  ||| | | ||||||  | ||||||||
Sbjct: 22505941 AAAAGAATTATT-AGAGCTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTGCCAAGGTTGGATGAGCATTTGAGAGTTTCATATGTTTCTTGTGGTTACGTTATGTTGAT 22505826

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: AGQN03004369.1
Description: Cannabis sativa cultivar Purple Kush 004373F, whole genome shotgun sequence

HSP 1 Score: 89.7595 bits (48), Expect = 1.426e-15
Identity = 64/72 (88.89%), Postives = 64/72 (88.89%), Query Frame = 1

Query:     1176 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTC 1247
                |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||||||
Sbjct:    55658 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTC 55587

HSP 2 Score: 56.5198 bits (30), Expect = 1.446e-5
Identity = 41/46 (89.13%), Postives = 41/46 (89.13%), Query Frame = 1

Query:     1162 AAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAAT 1206
                ||||| ||||||   || ||||||||||||||||||||||||||||
Sbjct:    55952 AAAAGAATTATT-GGAGCTTATTTTGAAGAAGCTCGATGGTTGAAT 55908


Match Name	Summary
AGQN03004425.1	E-Value: 4.236e-150, PID: 100.00 Description: Cannabis sativa cultivar Purple Kush 004429F, whole genome shotgun sequence [more]
AGQN03002522.1	E-Value: 4.236e-150, PID: 99.75 Description: Cannabis sativa cultivar Purple Kush 002526F, whole genome shotgun sequence [more]
AGQN03007528.1	E-Value: 1.985e-143, PID: 98.29 Description: Cannabis sativa cultivar Purple Kush 007533F, whole genome shotgun sequence [more]
CM010792.2	E-Value: 1.556e-134, PID: 89.43 Description: Cannabis sativa cultivar Purple Kush chromosome 2, whole genome shotgun sequence [more]
CM010796.2	E-Value: 7.240e-133, PID: 89.18 Description: Cannabis sativa cultivar Purple Kush chromosome 5, whole genome shotgun sequence [more]
AGQN03002427.1	E-Value: 2.679e-112, PID: 92.23 Description: Cannabis sativa cultivar Purple Kush 002431F, whole genome shotgun sequence [more]
CM010799.2	E-Value: 1.094e-21, PID: 83.76 Description: Cannabis sativa cultivar Purple Kush chromosome 7, whole genome shotgun sequence [more]
AGQN03004369.1	E-Value: 1.426e-15, PID: 88.89 Description: Cannabis sativa cultivar Purple Kush 004373F, whole genome shotgun sequence [more]

blastn of TPS CDS against pkv5 mRNA

Performed on: 2020-09-04
Details: blastn of TPS CDS against pkv5 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: PKGMv1-66368_t
Description: No definition line

HSP 1 Score: 195.019 bits (105), Expect = 3.873e-48
Identity = 175/210 (83.33%), Postives = 175/210 (83.33%), Query Frame = 1

Query:     1459 ATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGAT 1668
                |||| |||| ||||||| |  ||||||||||| | ||||||| | |||| ||   |  ||| |||||||||||||||||| ||||||||| | || |||||| ||  ||||||||| |||||| |||||| ||| ||| || |||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||| ||||||
Sbjct:        1 ATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAACTCAATAAGCTTATAATTAATGCATGGAAAGAAATAAATGAAGAGTTTTTGAAGCCAACTAAATTAGCTTCACCCATATTACTTCGTGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGAT 210

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: PKGMv1-80520_t
Description: No definition line

HSP 1 Score: 176.552 bits (95), Expect = 1.403e-42
Identity = 422/577 (73.14%), Postives = 422/577 (73.14%), Query Frame = 1

Query:     1090 TCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTA-GTTGGAATGAAAAGTAACAATATTGTAAC-CAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGT-GGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTAT-TGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATG-GATCTTCTCTACAAAAATGGTGATAA-CTATACACAA--GTTGGAAAAG 1657
                |||| ||| ||||||||| | ||| || ||||||| |||   |||||| |  | |||| |||||||  | | ||||| |||||| | || ||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||| | |||||| |  ||| | | ||||||  | |||||||| ||   |   ||| || |||||| |  | |    ||||||||| ||   || | |  || |||||||| |||||||| |||||||||   ||   | ||    | |  || | |||||||||| | ||||  ||    |      ||  |||||||||| |||||||||||| | || ||||||||||| |||||||| |||||||| ||||| |||  | | ||| | ||||   ||||||| |  | | ||||||||||| || ||||| ||| | |  |||||||  |   |||  ||||| ||| |||||| ||| ||| || | |  || |   |||||||| |||||| | |||||| | | ||||||||  ||||||||||
Sbjct:       10 TCTTATGAAGAATTTGAAAAGGAGCTTAAAAAGGAAGAATTATACAAACTCGAGTATGCAAAAGAAGAGATGAAAAGAATTATT-AGAGCTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTGCCAAGGTTGGATGAGCATTTGAGAGTTTCATATGTTTCTTGTGGTTACGTTATGTTGATAGCCA-CAAGTTATGTAGGAATGCAT-G-A----TATTGTAACACATGAAACTCTA-GATTGGCTCTCTAAAGACCCTAAGATTGTTTCAGCTTCCACTCTCCTATCAAGATTCATGGATGACATAGGCTC-TC----G------CA--AGAGAAATCACATACCATCTACAGTTGATTGTTACATGAAACAATATGGAGTATCAGAGGAAGAGGCAATTAAAGAACTTAATAAAAGAGTGGTCACCTAC-TGGAAAGAAATCAATGAAGACTTTATTAGGCCAACTGTTGTGCCTTTTCCTATCTTACTTCGTGTTCTTAATTTTACAAAAGT-AGCAGATCTTCTTTACAAAGAGGGTGATGATCAATACACAAATGTTGGAAAAG 562

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: PKGMv1-66366_t
Description: No definition line

HSP 1 Score: 124.846 bits (67), Expect = 5.154e-27
Identity = 224/298 (75.17%), Postives = 224/298 (75.17%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCA--A-CCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAA-ATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTA-TAA-ACAAGGCCAAGTTG-AAGAATTGAAAGAAGTGGTAAGAA--AGGAGATATTTGGAGAATTCTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAAT 288
                |||||||||||||||||||||  | | |||| |  |||||| ||   | ||||||||||||| || |||| || ||| ||||||   |||||||||||| | ||| || |||||| ||||| || || |||| |||  | |  ||   || |  |||| |  ||||  |||| |  |||  ||||  |  | ||||    |  |  |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||
Sbjct:        1 ATGTCCACTCAAATCTTAGCATCATCATCATCTTCAAATGAAAACCCAAATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACAATTCTTACATTACAATATTTCAGAACAAGATTTGGTTGAGGAATTAAAAG--AAGTGGTTAGAAGGGAAATATTTGG--AGAATCATCA-ATATCATCATCA-GCTTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAAT 291

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: PKGMv1-74151_t
Description: No definition line

HSP 1 Score: 121.153 bits (65), Expect = 6.667e-26
Identity = 128/159 (80.50%), Postives = 128/159 (80.50%), Query Frame = 1

Query:     1090 TCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTC 1247
                |||| ||| ||||||||| | ||| || ||||||| |||   |||||| |  | |||| |||||||  | | ||||| |||||| | || ||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||||||
Sbjct:       10 TCTTATGAAGAATTTGAAAAGGAGCTTAAAAAGGAAGAATTATACAAACTCGAGTATGCAAAAGAAGAGATGAAAAGAATTATT-AGAGCTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTC 167


Match Name	Summary
PKGMv1-66368_t	E-Value: 3.873e-48, PID: 83.33 Description: No definition line [more]
PKGMv1-80520_t	E-Value: 1.403e-42, PID: 73.14 Description: No definition line [more]
PKGMv1-66366_t	E-Value: 5.154e-27, PID: 75.17 Description: No definition line [more]
PKGMv1-74151_t	E-Value: 6.667e-26, PID: 80.50 Description: No definition line [more]

blastn of TPS CDS against cs10 genome

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 genome
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: NC_044377.1
Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence

HSP 1 Score: 725.007 bits (392), Expect = 0.000e+0
Identity = 394/395 (99.75%), Postives = 394/395 (99.75%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 802
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78969936 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 78969542

HSP 2 Score: 531.109 bits (287), Expect = 1.936e-148
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 78966497 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 78966205

HSP 3 Score: 479.403 bits (259), Expect = 7.113e-133
Identity = 346/388 (89.18%), Postives = 346/388 (89.18%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 77957145 AGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATGAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAGTTAGATTTCAATCTATTACAATGCATGCACAAAAAGGAACTTAGTGAA 77957529

HSP 4 Score: 468.323 bits (253), Expect = 1.540e-129
Identity = 344/388 (88.66%), Postives = 344/388 (88.66%), Query Frame = 1

Query:      408 AGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAA 792
                |||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | | |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||
Sbjct: 77998468 AGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATAAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTACGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAGTTAGATTTCAATCTATTACAATGTATGCACAAAAAGGAACTTAGTGAA 77998084

HSP 5 Score: 451.703 bits (244), Expect = 1.551e-124
Identity = 252/256 (98.44%), Postives = 252/256 (98.44%), Query Frame = 1

Query:     1158 GTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAG 1413
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 78967740 GTTTAAAAGATTATTAAGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGCTAGGGCAAGCGCTAGTGTTTGTAGGTACATGGATGACGTGGCTGGTCACAAG 78967485

HSP 6 Score: 438.776 bits (237), Expect = 1.207e-120
Identity = 266/278 (95.68%), Postives = 266/278 (95.68%), Query Frame = 1

Query:      132 GAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 409
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78976644 GAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACA---------TTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAG 78976376

HSP 7 Score: 412.923 bits (223), Expect = 7.317e-113
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78969438 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 78969216

HSP 8 Score: 411.077 bits (222), Expect = 2.632e-112
Identity = 273/296 (92.23%), Postives = 273/296 (92.23%), Query Frame = 1

Query:     1412 AGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCT-A--TATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |  || || || ||  || | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78937804 AGAATGAGCAAGAGAGAAATCATGTACTATCTACAATAGAATGTTACATGAAACAATATGGCGTATCAAAAGAAGAAGCATGTGATGAAAGGAATAGGCGAGTGGTTATTTCATGGAAAGAAATAAACGAAGAGTTTCTGAAACCAACTGAAGCAGCTTCACTTCACCTA-TA-TTAGT--TC-G-ATCTTGCAAGGGTTATAGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTTACCAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 78937515

HSP 9 Score: 409.23 bits (221), Expect = 9.465e-112
Identity = 336/392 (85.71%), Postives = 336/392 (85.71%), Query Frame = 1

Query:      407 TAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACAC-CCCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATC 795
                ||||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| ||  |||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||| | || || ||||||| |||  | ||||||||||||    |  | ||||||   || ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||| | | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||||  |||||||||||||||||||||||||
Sbjct: 78008321 TAGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACTTGACCGAGTTTTTGGCAAA-GA-AAAAAAGAACACTATGATGACGATGATTTCTTGTCAAAAGAAATATCTCGAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAATGTTCATGCTAAGCATTTCATTTCGATATGTGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGCCAGATTTTAATCTACTACAATCCCAGCACAAAAAGGAGCTTAGTGAAATC 78007932

HSP 10 Score: 401.843 bits (217), Expect = 1.584e-109
Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 78945919 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTATACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGACAGGT 78945697

HSP 11 Score: 387.07 bits (209), Expect = 4.435e-105
Identity = 332/392 (84.69%), Postives = 332/392 (84.69%), Query Frame = 1

Query:      407 TAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACAC-CCCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATC 795
                ||||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| ||  |||||||||||||| ||||||| || ||||||||||| ||||||| ||||||| |||| |||||||| ||| ||||||| || | |||| | | ||| |||||||   | || | |||||| |||    |  | ||||||   || ||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||| ||||| | | |||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 78019510 TAGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCTTCACATTTGAGTTGTGTTGTAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACTTGATTGAGTTTTTGG--CA-AAGACAAAAGATCACTATGATGACGATGATTTCTTGTCAAAAGAAATATCTCAAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAATCTTCATGCTAAGCATTTTATTTCGACGTATGAAAAAGATGCCTCACATAATAAAGTATTGCTACAACTTGCAAAGCTAGATTTCAATCTATTACAATCCATGCACAAAGAGGAGCTTAGTGAAATC 78019122

HSP 12 Score: 261.498 bits (141), Expect = 2.805e-67
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 1158
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78968923 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 78968783

HSP 13 Score: 233.798 bits (126), Expect = 6.114e-59
Identity = 136/141 (96.45%), Postives = 136/141 (96.45%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACG 1158
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct: 78945431 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAAGAATTTGAACAAGGGTTTGAAAATGAGGAAACTTACAGAGTTTACTATGCAAAAGAAACG 78945291

HSP 14 Score: 222.718 bits (120), Expect = 1.323e-55
Identity = 128/132 (96.97%), Postives = 128/132 (96.97%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 132
                |||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78977065 ATGTCGTCTCAAATCTTAGCAACCTCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTG 78976934

HSP 15 Score: 219.025 bits (118), Expect = 1.712e-54
Identity = 188/223 (84.30%), Postives = 188/223 (84.30%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGT 1021
                ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||  || ||||||||  |||||||||| |||||||||||||||||| ||||||| | ||||||||||| | | ||||| | | |||||||||| ||||
Sbjct: 78007359 AGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAACATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGAACATTTGAAGAACTTGAACTCCTAACTCAAGCAATTGAAAGGT 78007137

HSP 16 Score: 211.638 bits (114), Expect = 2.865e-52
Identity = 198/240 (82.50%), Postives = 198/240 (82.50%), Query Frame = 1

Query:     1459 ATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATT 1698
                |||| |||| ||||||| |  ||||||||||| | ||||||| | |||| ||   |  ||| |||||||||||||||||| ||||||||| | || |||||| ||  ||||||||| |||||| |||||| ||| ||| || |||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||| ||||||   |||||||  ||||| |||||||| |||
Sbjct: 78004068 ATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAACTCAATAAGCTTATAATTAATGCATGGAAAGAAATAAATGAAGAGTTTTTGAAGCCAACTAAATTAGCTTCACCCATATTACTTCGTGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGATTCTGTTGCTGCTTTGCTAATTGATCCCATT 78003829

HSP 17 Score: 206.098 bits (111), Expect = 1.333e-50
Identity = 165/192 (85.94%), Postives = 165/192 (85.94%), Query Frame = 1

Query:      799 AGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAA 990
                ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||  |||||||||| |||||||||||||||||| |||||||||  |||||||||
Sbjct: 78018536 AGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAATATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGTACTTTTGAAGAA 78018345

HSP 18 Score: 195.019 bits (105), Expect = 2.885e-47
Identity = 120/126 (95.24%), Postives = 120/126 (95.24%), Query Frame = 1

Query:      682 TATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAA-----GTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 802
                ||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 78946168 TATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAATTAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCTTGCACAAAAAGGAGCTTAGTGAAATCTCAAGGT 78946043

HSP 19 Score: 183.939 bits (99), Expect = 6.245e-44
Identity = 152/178 (85.39%), Postives = 152/178 (85.39%), Query Frame = 1

Query:      151 GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGAT 327
                ||||| ||||| ||||||||| | ||||  || ||||||||||| || ||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||  ||||||||||||||| |  ||| |||||
Sbjct: 77955198 GTTGAGGAATTAAAAGAAGTGATTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAATTAATATTGATGAT 77955374

HSP 20 Score: 180.245 bits (97), Expect = 8.079e-43
Identity = 173/210 (82.38%), Postives = 173/210 (82.38%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  |||| || ||||||||||  |  | | |||||| |  | ||||| |||||  ||||||||||| |||  |  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 78008672 CTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGATT-T--TCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 78008466

HSP 21 Score: 180.245 bits (97), Expect = 8.079e-43
Identity = 173/210 (82.38%), Postives = 173/210 (82.38%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  |||| || ||||||||||  |  | | |||||| |  | ||||| |||||  ||||||||||| |||  |  ||||||||||||||||||||||||||| |||||||||||
Sbjct: 78019861 CTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGATT-T--TCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTT 78019655

HSP 22 Score: 145.159 bits (78), Expect = 2.947e-32
Identity = 152/188 (80.85%), Postives = 152/188 (80.85%), Query Frame = 1

Query:     1175 AAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAG--G-ATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATT 1359
                |||||||| | || |||||| | ||||| ||  |||  | |  ||| |||||||| || ||| |||| ||| ||  |||||| |  | |||||| || |||||||  |   |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 78947858 AAGGTTATCTGGATGAAGCTTGGTGGTTAAAGAAAGCTGAACGCATTCCAAGTTTTGATGAGTATTTGAAATTTGGTTTGGTCAATTGTGGTTACTTAATGTTGACAGTGAGCTCTTTAATTGGAATGAAAGGTAACAATATTGTAACCAAACAAGTTTTTGAGTGGCTCTCCAAAGGCCCCAAGATT 78947671

HSP 23 Score: 115.613 bits (62), Expect = 2.311e-23
Identity = 99/116 (85.34%), Postives = 99/116 (85.34%), Query Frame = 1

Query:     1587 TGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCAT 1702
                |||||| ||||||   ||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||| |||||||| ||||| | |||    ||| ||||||||||||
Sbjct: 78039037 TGCTCTTAATCTTTTCAGGGTTATGGATCTTCTCTACAAAAATGGTGATGATTATACACATGTTAGAAAAGTCACAAAAGATAGTGTTGCAG-CTT----ATTCATCCAATTCCAT 78038927

HSP 24 Score: 108.226 bits (58), Expect = 3.867e-21
Identity = 81/92 (88.04%), Postives = 81/92 (88.04%), Query Frame = 1

Query:      198 CTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAAT 288
                |||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||| | ||||||||||| | ||||||| |||||
Sbjct: 77999329 CTTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGGCTTATCATTTTGAAACTGAAATAGAAAAT 77999238

HSP 25 Score: 95.2994 bits (51), Expect = 3.010e-17
Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 1

Query:     1162 AAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGT 1263
                ||||| ||||||   |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||| ||||  ||| | ||||||
Sbjct: 76704580 AAAAGAATTATT-GGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTCTCTTATGTTTCTTCTGGT 76704479

HSP 26 Score: 89.7595 bits (48), Expect = 1.401e-15
Identity = 64/72 (88.89%), Postives = 64/72 (88.89%), Query Frame = 1

Query:     1176 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTC 1247
                |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||||||
Sbjct: 76672644 AGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTC 76672573

HSP 27 Score: 67.5997 bits (36), Expect = 6.562e-9
Identity = 56/66 (84.85%), Postives = 56/66 (84.85%), Query Frame = 1

Query:      341 ATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTT 406
                |||||  ||| ||| ||| ||||  ||||||||||||||||||||||||||||| |||  ||||||
Sbjct: 77999200 ATGAAGATTTACATCATGTTTCTGATCGGTTTAGACTTCTACGACAACATGGATTTAGAATTTCTT 77999135


Match Name	Summary
NC_044377.1	E-Value: 1.936e-148, PID: 99.75 Description: Cannabis sativa chromosome 6, cs10, whole genome shotgun sequence [more]

blastn of TPS CDS against cs10 mRNA

Performed on: 2020-09-05
Details: blastn of TPS CDS against cs10 mRNA
Display provided by the neXtProt Feature Viewer

Show Results Table

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030653866.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X1, mRNA

HSP 1 Score: 3011.16 bits (1630), Expect = 0.000e+0
Identity = 1681/1704 (98.65%), Postives = 1681/1704 (98.65%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                |||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:       51 ATGTCGTCTCAAATCTTAGCAACCTCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAA---------CATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGCTAGGGCAAGCGCTAGTGTTTGTAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1745

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030653867.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X2, mRNA

HSP 1 Score: 1382.41 bits (748), Expect = 0.000e+0
Identity = 787/804 (97.89%), Postives = 787/804 (97.89%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGG 804
                |||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:       51 ATGTCGTCTCAAATCTTAGCAACCTCATCCAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTATTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAA---------CATTAATGATAATAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGTTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGG 845

HSP 2 Score: 1236.53 bits (669), Expect = 0.000e+0
Identity = 681/687 (99.13%), Postives = 681/687 (99.13%), Query Frame = 1

Query:     1018 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1704
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct:      840 AGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACTTCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGCTAGGGCAAGCGCTAGTGTTTGTAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTATATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGTGTTGCTGTCTTGCTCATTGATCCAATTCCATAA 1526

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030622631.1
Description: PREDICTED: Cannabis sativa germacrene-A synthase-like (LOC115695574), mRNA

HSP 1 Score: 1271.62 bits (688), Expect = 0.000e+0
Identity = 1378/1713 (80.44%), Postives = 1378/1713 (80.44%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAA-GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTTA-TGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACC--CCA-ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAA-GATACTTTTGCAATCTTTT-GAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTT-GCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGG-TACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGA-GAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAA-TCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCAT 1702
                ||| ||||||||||||||| | | |||| |  |||||||||   | ||| ||||||||| || |||| ||| |  || ||   |||||||||||| ||||| || |||||| | ||| || || |||| ||| ||| | |||||    || ||||| ||||| ||||||||| | ||||  || ||||||||||| || ||| | ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||||  |||||||||||||||      |||| | | | |  |     |||||  ||| ||  ||| ||| ||||| ||||||||||||||||||||||||| ||   ||||||  ||||||||||| || |||||||||||| |||| ||||||||| |||| ||||  ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||||||| ||| |||||||     || |||||||||||||    | | |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||   ||||||||||| |||| |||   || |||||| ||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| | || ||||||||  |  ||||||| |||||||||||||||||| ||||||||| | ||||||||| | ||||||| | | | |||||||| |||||||| | ||||||| | ||||||||  |||  |||||  |||| | || |||||| |||  ||||| |||  ||  || || ||||| |||  | | ||||| || ||||| |||| |||| | |||| ||||||| |||||||  ||||| |   |  | |||| || ||||||||||| ||| ||  ||||  ||| |||||||| || ||| | || ||| || |||||| ||  | |||||| | |||||||||  ||  ||||||| ||||||||||||| |   ||||||||||| ||| ||||||| ||||||||||| ||||| |  |||||| |||| |||   | || | |||| ||| || ||||||||| | ||||  ||||||  |||| |||| ||  | | |   ||  ||  || ||||||| || ||||   || |||| || |  ||||| ||||| | ||||||| |||||| || | |  | | |||||||||||||||||| ||||||||| | |  |||||||||| |||||||||||||||| |||||||||| || | ||| |||||||||||||||| | | ||||  ||| |||   |||||| | ||||||||| |||| |||||||  |||||||  ||||| ||| ||||||||||||
Sbjct:        1 ATGCCCACTCAAATCTTAGTATCATCATCTTCAAATGACAACCCAAATATAATTGTTCGTCCTACAAAAAAATTCCACCCAAATATTTGGGGAGAACGATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAA-CAAAAGGTTGAGGAATTAAAAGAAGTGATTAGAAGAGAAATATTTGGAGA-TTATTATTATGATGGTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAAACTGAAATAGAAAATAAGCTTCAATGCATTTACAACAAAAT------TAAT-A-T-TGA--T----GATGAAGATTTACACCATGTTTCAATTCGATTTAGACTTCTACGACAACATGGATTTACAATTTCTTCTGATATATTTGAAAAATTCAAAGATGAGGATGGGAACTTTAAAAAATGCTTGGTAAGTGATACCCTTGGTTTGCTTAGCTTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACCTAAATGAGTTTTTGG---CGAAGAAAAAAGAACACCATGAAGACGATGATCCATTATCGAAAGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTAAATCTTCATGCAAGGCATTTCATTTCGATATATGAAAAAGATGCCTCACATAACAAAGTATTGTTACAACTTGCAAAGTTAGATTTCAATCTATTACAATGCATGCACAAAAAGGAACTTAGTGAAGTCAGCAGGTGGTGGAAAGAATCAGATTTTGTACACAAATTTCCATTTGCAAGAGATAGGATTGTAGAATTGTACCTTTGGATATTAGGAGTTTATTATGAACCCCAATACTGTTTGGCAAGAAATATTTTAATCAAAATCATAGCTTTGGCCTCAATTGCTGATGATATTTATGATGCATATGGTACACTTGAAGAACTTGAGCTCCTAACTCATGCAATTGAAAGGTGGGATATAAATTGTGTAGATAAACTGAATCAGGAATATATGCAAACATTTTATAAAGATG-TTTTG-AATTGTTACGAAGAGTTTGAGCAACTGCTAGAAAAAGAAGAAACATACAGAGTTCATTATGCAAAAGAAGCGTTTAAGGGATTAGTCCGATCTCATTTGGATGAAGCTCGATGTTTGCATAGAGGACTCATCCCAAGTTTTGAAGAGTACTTGAAATTTGCTTTGGATAATTGTGGTTACTACATGTTGATA-CTAAGCTCTTTGGTTGGAATGAAAACT---AATATTGTAACAAAAGAAGTTTTTGAGTGGCTCTCGAAAGATCGAAAGATTATTAGAGCATCTGTTACTATTTGTAGGCTA-ATGGATGACATAGCTGAACACAAGTTTGAGGAAGATGATTA-TGAGGAACATTCAGCAGTAGAATGCTATATGATTGAACATGGCGTTTGTGAAGAGGAAGCCTATGATGAACTGAATAAGCTAATAATGAATGCATGGAAAGAAATAAATGAAGAGTTTGTGATGCCAACTGAAGTAGCTTCACCTATATTACTTCGTGCTCTTAACTTTTG-TAGGGTTATGGATCTTATTTTCAAATTTGGAGATGGTTATACAAACGTTGGAAAAATCACCAAAGATATTGTTGCTGCTTTGCTTATTCATCCAATTCCAT 1684

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030654009.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115724669), mRNA

HSP 1 Score: 1173.74 bits (635), Expect = 0.000e+0
Identity = 1370/1727 (79.33%), Postives = 1370/1727 (79.33%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAA-ATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAA-GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAAT--TC----T--T-AT--G-------TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACAC-CCCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAG-ATACTTTTGCAATCTTT-TGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAA-AGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCAT-AT-ACCA-TCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTTGGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATT 1698
                ||||||||||||||||||||| | |||| |  |||||||||   | ||||||||||||| || |||| || ||| ||||||   |||||||||||| ||||| || |||||| | ||| || || |||| ||| ||| | |||||    || ||||| ||||| || |||||||| ||||  || |||||||||||||  ||    |  | ||  |       ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  |||| || ||||||||||  |  | | |||||| |  | ||||| |||||  ||||||||||| |||  |  ||||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| ||  |||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||| || | |||| | || || |||||||  ||  | ||||||||||||    |  | ||||||   || ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||| | | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||||  |||||||||||||||||||||||||   ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||  || ||||||||  |||||||||| |||||||||||||||||| ||||||| | ||||||||||| | | ||||| | | |||||||||| |||||||| | |||||| || |||| |||| ||| |||||| ||| | | || ||||||| || |||||| |||  || ||| || ||||| |||| | ||  ||| || |||||||| | |||| | |||| |||||||  ||||||| || ||| |   |   |||||||| |||||| |||||||||||   ||| |  | |||| ||| || ||| |  |  || || |     |||  | ||||  |   |||||||| |   | ||||| |||||||||||||  ||   ||||||||||||| | ||||| ||||||||||||||||| |  |||||| |||| |||   | || | |||| |||  |||||||||| | ||||  ||||||  |||| || ||| |||| || || |  | ||| | || ||||  || |||| |||| ||||||| |  ||||||||||| | ||||||| | |||| ||   |  ||| |||||||||||||||||| ||||||||| | || |||||| ||  ||||||||| |||||| |||||| ||| ||| || |||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||| ||||||   |||||||  ||||| |||||||| |||
Sbjct:        1 ATGTCCACTCAAATCTTAGCATCATCATCTTCAAATGACAACCCAAATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACGATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAA-CAAAAGGTTGAGGAATTAAAGGAAGTGGTTAGAAGAGAAATATTTGGAGAATCATCAATATCATCATCAGCTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGATT-T--TCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTTCTGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCCTCACATTTGAGTTGTGTTGGAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACTTGACCGAGTTTTTGG-CAA-GA-AAAAAAGAACACTATGATGACGATGATTTCTTGTCAAAAGAAATATCTCGAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAATGTTCATGCTAAGCATTTCATTTCGATATGTGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGCCAGATTTTAATCTACTACAATCCCAGCACAAAAAGGAGCTTAGTGAAATCAGCAGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAACATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGAACATTTGAAGAACTTGAACTCCTAACTCAAGCAATTGAAAGGTGGGATATAAATTGCATTGATACACTCAATCAAGAATATTTGAAAACATTTTATAAGGAT-CTTTTG-AATTGTTATGAAGAGTTTGAGCAAGTGCTTACAAAAGAAGAAACTTATAGAGTTCATTATGCAAAAGAAGTGTTTAAAGAG-TTAATCCGATCATATTTTGATGAAGCTGGATGGTTGAATAGTGGACATGTCCCAAATTTTGAAGAGTACATGGAATTTGCAACCATTAATTGTGGTNNTAATATGTTGATAGTGAGTTCTTTGGTTGGAATGAAAAC-AAG--TATTGTAACCAAAGATGTTTTTGAGTGGCTCTCCAAAGATCGAAAGATTATTAGAGCATCTGTTATTATTTGTAGGCTCATGGATGACATAGCTGAACACAAGTTTGAG-AA-AGACAAAT-ATGATGAAGATTCTGCCATTGAATCGTATATGATGCAACATGGTGTTTGTGAAGAAGAAGCCTATGATGAACTCAATAAGCTTATAATTAATGCATGGAAAGAAATAAATGAAGAGTTTTTGAAGCCAACTAAATTAGCTTCACCCATATTACTTCGTGTTCTTAATTTTTCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATGGTTTTACACATGTTGGAAAAGTCACCAAAGATTCTGTTGCTGCTTTGCTAATTGATCCCATT 1710

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030622635.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695577), mRNA

HSP 1 Score: 811.799 bits (439), Expect = 0.000e+0
Identity = 826/1012 (81.62%), Postives = 826/1012 (81.62%), Query Frame = 1

Query:        1 ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAAAATTGTTCGGCCAACAACAA-ATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAAT-----TC-T--T-AT--G-------TGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACAC-CCCA--ATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTATATTTGAAGAA 990
                ||||||||||||||||||||| | |||| |  |||||| ||   | ||||||||||||| || |||| || ||| ||||||   |||||||||||| | ||| || |||||| | ||| || || |||| ||| ||| | ||||||   | ||||| ||||| ||||||||||| ||||  || |||||||||||||     || |  | ||  |       ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||  | |  |||| || ||||||||||  |  | | |||||| |  | ||||| |||||  ||||||||||| |||  |  ||||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||||||||||  |||||||||||||| ||| |||||  ||||| ||  |||||||||||||| ||||||| || ||||||||||| ||||||| ||||||| |||| |||||||| ||| ||||||| || | |||| | | ||| |||||||   | || | |||||| |||    |  | ||||||   || ||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||| ||||| | | |||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| |||| | ||  || ||| || || || ||||||||| |||| |||||||| || ||  ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||  || ||||||||  |||||||||| |||||||||||||||||| |||||||||  |||||||||
Sbjct:       59 ATGTCCACTCAAATCTTAGCATCATCATCTTCAAATGAAAACCCAAATAAAATTGTTCGTCCTACAAAAACATT-TCATCCACATATTTGGGGAGAACAATTCTTACATTACAACATTTCACAACAAGATTTGTATTGTCAACAAGAAAAGGTTGAGGAATTAAAAGAAGTGGTTAGAAGAGAAATATTTGGAGAATCATCATCATCATCATCAGCTTATTATGATGCTTGGAAAAATCAATTGAAGATAATTGATGTGGTAGAACGTTTGGGATTGTCTTATCATTTTGAATCTGAAATAGAAAATATGATAGAACAAATCTACAACAAAACCAATAGTGATGATT-T--TCTCAAAGATGAAGATTTGCATGATGTTTCCTTGTGGTTTAGACTTCTACGACAACATGGATTTAGGGTTTCTTCTGATATATTTGAAAAATTCAAAGATGAAGATGGCAACTTTAAAAAATATTTGGTAAGTGATACTCTTGGTTTGCTTAGCCTATATGAAGCTTCACATTTGAGTTGTGTTGTAGAAAATATACTTGATGAAGCACTTGCTTTCACAACAACACACTTGATTGAGTTTTTGG--CA-AAGACAAAAGATCACTATGATGACGATGATTTCTTGTCAAAAGAAATATCTCAAGCCCTAGAGAGACCCTTAAGAAAGACCCTAGTAAATCTTCATGCTAAGCATTTTATTTCGACGTATGAAAAAGATGCCTCACATAATAAAGTATTGCTACAACTTGCAAAGCTAGATTTCAATCTATTACAATCCATGCACAAAGAGGAGCTTAGTGAAATCAGCAGGTGGTGGAAAGAATCAAACTTTGTACAAAAATTCCCTTTTGCAAGAGATAGAATTGTGGAGCTCTATCTTTGGATGTTAGGAGTCTATTATGAACCCCAATACTCTTTGGCAAGAAATATTTTAGCCAAAATCATAGCTTTTTCCTCAATTGCTGATGATATTTATGATGCATATGGTACTTTTGAAGAA 1063

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030622957.1
Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X1, mRNA

HSP 1 Score: 617.901 bits (334), Expect = 1.078e-175
Identity = 1238/1669 (74.18%), Postives = 1238/1669 (74.18%), Query Frame = 1

Query:       52 ATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGT-AAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACA-AAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATG--T--TTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTA-TATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAAC-CAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCG-CTAGTGT--TTGC-AGGTACATGGATGACGTGGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCA-TGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAA-CTATACACAA--GTTGGAAAAGT-CACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCAT 1702
                |||| ||| ||||||||||| | ||| |||||||||||||| || |||||  | |||||| ||||| || || |||| |||  ||  |||||||   ||||||||||||| | | |||| || |||||| |||||| ||     | ||   | | |  | |   || ||| ||||||||| |||||     |  ||||||||||||| || ||||||||||||||||||||  | ||||  | |  |||| | ||      || | | || | || | || ||  || | ||||  | | | |||||||||||| || |||||||| |  || |||||||||||| ||  ||||| | |  ||||||||| || |||||||| ||| | || |||||||||||| |  |  |   ||| ||   ||   |||||||||||||| |||||||| || || ||||| | |||||||||||   ||||||||||||| ||| ||||||| ||||  ||||| |  |   || ||| ||||| ||||   || ||  || ||  | || ||  |||     |||||||   || |||  | |||||  ||||||||||| ||| ||  || ||||| |||| || ||| ||||| |||||||| |||||||| ||||||||| |||||||| | |||||||||||||| ||||||||| | ||||   | ||||||||||| |||||||||||  | ||||||||||||||    ||   |||| | || || || ||||||||| ||||||| |||||||||||  |||||||||| || || |||||||||||| ||||||||   ||||| ||  |||||   ||  |||| ||| |  |||||||| ||||||||||||||||| ||||||||| || |||| || | | |||| ||||   |||||||| | |||||||||| ||||||||||||||||||  | | |||||| ||  ||| |||||||||| || | ||| | |||| ||| ||||||||| | ||| || ||||||| |||   |||||| || | |||| |||||||  | | ||||| ||||||   |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | ||| ||||  ||| | |||||| |  |  ||||||| ||      ||| || || ||| |  | |    | ||||||| ||   || | |  || |||||||| |||||||| || ||||||    || ||  ||| | |  || | |||| |||||||||  | | |  || ||||  ||||||| |||||||||| |||||||||||| | || ||||||||||| |||||||| |||||||| ||||| |||  | | ||| | ||||   ||||||  |   || ||||||||||| || ||||| ||| | |  ||| | |  |   | |  ||||| |||||||||| ||| ||| || | |   |  | |||||||| |||||| | || ||| | | ||||||||  ||||||||||| | | ||||| ||| ||||||  ||||| || ||| |||| ||||
Sbjct:      124 ATTGCTCGTCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAAAGTTGAAGAATTAATACAAGTTGTAAAGAAA-GAGATA-TT-----A-TC---T-TCA--AAT--CATGATCAATTGAAGTTGATTGACAATCTCCAACGTTTGGGATTATCATATCATTTTGAGAGTGAAATTGAGAAAT-TGTTGGAACA-A-TT------AAGT-ATCACTCATCA-TC-AAAATC-ATCATG--A-TCTACATGATGCTTCTCTTTGGTTTAGATTATTAAGACAACATGGATTTAATGTTTCATCAAGTATATTTGAAAAATTCAAAGACGAGGAAGGTAACTTTAAAGAAAGCCTAATAACCGA-TG-TTCC--AGGTTTGCTTAGCTTGTATGAGGCTTCGCACTTGAGTTATGTTGGAGAAAGCATACTAGATGAAGCACTTGCTTTCACAACCACTCACCTTAAGGCTATTGTGGCAAATAGTAAA---GATCA-TCC-AT--T-AT-CA-CATC-----AAATATCCATAGTCCTGCATAGGCCTCTAAGAAAGACCATAGAGAGGCTTCATGCTAGGTTTTACATCTCAATCTATGAAAAGGATGCCTCTCATAACAAACTATTGCTAGAGCTTGCAAAGTTAGACTTCAATCTACTTCAATGTTTCCACAAAAAGGAACTTAGTGAAATTACGAGGTGGTGGAAGGAGCATGAGTTTGCAAAGAAATTCCCTTTTGCAAGAGATAGGATGGTGGAACTGTATTTTTGGATATTGGGTGTATATTATGAACCCAAATACTCTCGAGCAAGGAAGCTTTTAACCAAAGTCATTGCATTGACCTCAATCACTGATGATATTTATGATGCATATGGTACTA-TTGATGAGCTTCAGCTTCTTACCAAAGCAATTCAAAGGTGGGACATAAATTGTATGGATAAACTTAAGCAAGAATATTTAAAGACATATTATAAGGTAATGTTGGATTCTTATGAAGAATTTGAAAAGGAGCTTAAAAAGGAAGAATTATACAAACTTGAGTATGCAAAAGAAGAGATGAAAAGAATTATT-GGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTCTCTTATGTTTCTTCTGGTAACGTTTTGTTGATAGCCACAAGTTTTGTAGGGATGCAT-G-A----TGTTGTAACACATGAAACTCTA-GATTGGCTCTCGAAAGACCCTAAAATTGTTT---CA-GCTTCTACTCTCCTTTCTAGGTTCATGGATGATATTGGTTCTCGCAAGTTTGAGCAAAAGAGAAATCACATACCATCTACAGTGGATTGTTACATGAAACAATATGGGGTATCAGAGGAAGAGGCAATTAAAGAACTTAATAAAAGAGTGGACACC-CACTGGAAAGAAATTAATGAAGACTTTATTAGGCCAGCAGTTGTGCCCTTTCCTATCTTAGTTCGTGTTCTTAATTTTACAAAAATAGTAGATCTTCTTTACAAAGAGGGCGATGATCAATACACAAATGTTGGAAAAGTGCTC-AAAGAAAGCATTGCTGCTTTGCTTATAGATTCAATCCCAT 1726

[Close]

BLAST of KY014555.1 vs. Genbank
Match Name: XM_030622955.1
Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115695864), mRNA

HSP 1 Score: 568.042 bits (307), Expect = 1.101e-160
Identity = 1229/1669 (73.64%), Postives = 1229/1669 (73.64%), Query Frame = 1

Query:       52 ATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGATTTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAAGTTGAAGAATTGAAAGAAGTGGT-AAGAAAGGAGATATTTGGAGAATTCTTATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTTTGGGATTGTCCTATCATTTTGAGAGTGAAATACA-AAATGAGCTTCAACACATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTTGCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGGTTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAAGAATGTTTGGCGAGTGACACC---G-TT--GGTTTGCTTAGCTTATATGAGGCCTCACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCACTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCCAATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTTAAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATGAAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGATTTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAGGTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATAGGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAATACTCTTTTGCAAGAAATATTTT-AGTGAAGATCATAGCACTTTCCTCAATCGCTGATGATATTTATGATTCATATGGTA-TATTTGAAGAACATAAGCTCCTTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCATCCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGAATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAAAAGAAACGTTTAAAAG-ATTATTAAAAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTTGGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGAAAAGTAACAATATTGTAAC-CAAACAAGTTTTCGAGTGGCTCTCCAAAGACCCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGT-GGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAGAATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAAATGAATAGGCGAGTGGTTATTGCA-TGGAAAGAAATAAACGAAGAGTTTCTCAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTGCTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAA-CTATACACAAGT-T-GGAAAAGTCACT-AAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCCAT 1702
                |||| ||| ||||||||||| | ||| |||||||||||||| || |||||  | |||||| ||||| || || |||| |||  ||  |||||||    |||||||||||| | | |||| || |||||| |||||| ||     | ||   | | |  | |   || ||| ||||||||| |||||     |  ||||||||||||| || |||||||| |||||||||||  | |||| |  |  |||| | ||   | |  ||  ||   | | | ||  |  ||||| || | | | | ||||||| |||| |||||||||||||  || |||||  ||||| || |||||| | |   |||||||| || |||||||| ||||| || ||||||||||||     | | | | | |||   | ||  |||||||||||||| |||||||| || || ||||| | |||||||||||   ||||||||||||| ||| ||||||| ||||  ||||| |  |   || ||| ||||| ||||||    ||  || ||  | || ||  |||     |||||||   |||| | || |||||  ||||||||||| ||| ||  || ||||| |||| || ||| ||||| |||||||| |||||||| ||||||||| |||||||| | |||||||||||||| |||||| || | ||||   | ||||||||||| |||||||||||    ||||||||||||||    ||   || | | || || || ||||||||| ||||||| |||||||| ||  |||||||||| || || |||||||||||| ||||||||   ||||||||  |||| |   ||| |||| ||| |  |||||||| ||| ||||| ||||||| ||||||||| || ||||  | | | |||| ||||   |||||||| | |||||||||| ||||||| ||||||||||  | |||||||| ||  ||| |||||||||| || | ||| | |||| ||| ||||||||  | ||| || |||| || |||   |||||| |  | |||| |||||||  | | ||||| | ||||   |||||||||||||||||||||||||||||||||||||||  | ||||| || || |||||||| | |||||| |  ||| | |||| | |  |  ||||||| ||      ||| || |||||| |  | |    ||||||||| ||   || | |  || |||||||||||| |||| || ||||||   ||   | ||    | |  || | |||||||||| | ||||  || ||||  |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| || |||||||| ||||| |||  | | ||| | ||||    |||||| |   || ||||||||||| || ||||| ||| | |  |||||||  |   |||  ||||| |||||||||| ||| ||| || | |  || || |||||| | |||||| | |||||| | | ||||||| || | ||||||| | || ||||| ||| ||| ||  ||||| || ||| |||| ||||
Sbjct:       95 ATTGCTCGCCCAACAACAAAATTTCACCCTTCTATTTGGGGTGATCGATTCCTCCATTACAATATTTCAGAACAAGACTTGGTTTGCAAACAAGAAAGAGTTGAAGAATTAATACAAGTTGTAAAGAAA-GAGATA-TT-----A-TC---T-TCA--AAT--CATGATCAATTGAAGTTGATTGACAATCTCCAACGTTTGGGATTATCATATCATTTCGAGAGTGAAATCGAGAAATTA-TTGGAACA-A-TT---A-AGTATCGGC---ACTCA-TC--A--TCAAA-ATAATAATATACATGATGTTTCTCTTCGGTTTAGACTATTAAGACAAAGTGGATTTAAGGTTTCATCAAGCATATTTGAAAAATTCAAAGACGAGAAAGGTAACTTTAAAGAA----AGCCTAAT-A-ACCGATGTTTCAGGTTTGCTTAGCTTGTATGAGGCTTCGCACTTGAGTTATGTTGGAGAAAGCATACTAGATGAAGCACTTGCTTTCACAACCACTCACCTTAAGGCTATTGTGGCAAATAGTAAAAA---TCA-TCC-AT--T-AT-CA-CATC-----AAATATCCATAGCCTTGGAAAGGCCTCTAAGAAAGACCATAGAGAGGCTTCATGCTAGGTTTTACATCTCAATCTATGAAAAGGATGCCTCTCATAACAAACTATTGCTAGAGCTTGCAAAGTTAGACTTCAATGTACTTCAATGTTTCCACAAAAAGGAACTTAGTGAAATTATGAGGTGGTGGAAGGAGCATGAGTTTGTAAAGAAATTCCCTTTTGCAAGAGATAGGATGGTGGAACTATATTTTTGGATATTGGGTGTATATTATGAACCCAAATACTCTCGAGCAAGAAAGCTTTTGACCAAAG-TCATTGCATTGACCTCAATCACTGGTGATACTTATGATGCATATGGTACTA-TTGATAAGCTTGAGCTTCTTACCAAAGCAATTCAAAGGTGGGACATAAATTGTCTGGATAAACTTGAGCCAGAATATTTAAAGACATATTATAAGGTAATGTTGGATTCTTATGAAGAATTTGAGAAGGAGCTTAAAAAAGAAGAATTATACAAACTCGAGTATGCAAAAGAAGAGATGAAAAGAACTATT-GGAGGTTATTTTGAAGAAGCTCGATGGTTGAATGAAGGATATTTCCCAAGCTTCGATGAGCATTTGAGAGTTTCATATGTTTCTTCTGCTAACGTTTTGTTGATAGCCACAAGTTTTGTAGGAATGCAT-G-A----TATTGTAACACATGAAACTCTA-GATTGGCTCTCCAAACACCCTAACATTGTTTCAGCTTCCACTCTCCTCTCAAGATTCATGGATGACATAGGCTC-TCGCAAGTTTGAGCAAGAGAGAAATCACATACCATCTACAGTGGATTGTTACATGAAACAATACGGGGTATCAGAGGAAGAGGCAATTAAAGAACTTAATAAAAAAGTGGTCACC-CACTGGAAAGAAATTAATGAAGATTTTATTAGGCCAACTGTTGTGCCTTTTCCTATCTTAGTTCGTGTTCTTAATTTTACAAAAGTAATAGATCTTTTTTACAAAGAGGGTGATGATCAATACACACGTGTTGGAAAAG-CGCTCAAAGAAAGCATTGATGCTTTGCTTATAGATTCAATCCCAT 1697


Match Name	Summary
XM_030653866.1	E-Value: 0.000e+0, PID: 98.65 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X1, mRNA [more]
XM_030653867.1	E-Value: 0.000e+0, PID: 97.89 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115724563), transcript variant X2, mRNA [more]
XM_030622631.1	E-Value: 0.000e+0, PID: 80.44 Description: PREDICTED: Cannabis sativa germacrene-A synthase-like (LOC115695574), mRNA [more]
XM_030654009.1	E-Value: 0.000e+0, PID: 79.33 Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115724669), mRNA [more]
XM_030622635.1	E-Value: 0.000e+0, PID: 81.62 Description: PREDICTED: Cannabis sativa alpha-humulene synthase-like (LOC115695577), mRNA [more]
XM_030622957.1	E-Value: 1.078e-175, PID: 74.18 Description: PREDICTED: Cannabis sativa germacrene-A synthase (LOC115695866), transcript variant X1, mRNA [more]
XM_030622955.1	E-Value: 1.101e-160, PID: 73.64 Description: PREDICTED: Cannabis sativa alpha-humulene synthase (LOC115695864), mRNA [more]

Interpro result TPS-TSA-THC Csativa

Performed on: 2021-09-02
Display provided by the neXtProt Feature Viewer


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..47
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..69
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 1..68
None	No IPR available	TMHMM	TMhelix		coord: 45..67
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..57
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 10..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..30
None	No IPR available	PANTHER	PTHR31225	FAMILY NOT NAMED	coord: 13..566
None	No IPR available	PANTHER	PTHR31225:SF42		coord: 13..566
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..49
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 13..35
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 29..213 e-value: 5.5E-54 score: 182.8
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 244..511 e-value: 1.1E-102 score: 343.0
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 29..550 e-value: 6.7E-185 score: 617.3
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 239..566
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 68..238 e-value: 6.7E-185 score: 617.3
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 26..239

Cannabis sativa isolate Finola_TPS9 terpene synthase mRNA
complete cds

Interpro result TPS-TSA-THC Csativa

blastn of TPS CDS against cs10 mRNA

blastn of TPS CDS against cs10 genome

blastn of TPS CDS against pkv5 mRNA

blastn of TPS CDS against pkv5 genome

NCBI Download

Sequences

Sequence	ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAA AATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGAT TTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAA GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTT ATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTT TGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAC ATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTT GCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGG TTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAA GAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTC ACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCA CTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC AATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTT AAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATG AAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGAT TTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAG GTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATA GGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAA TACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAAT CGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCC TTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCAT CCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGA ATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAA AAGAAACGTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGG TTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTT GGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGA AAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGAC CCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGT GGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAG AATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAA ATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCT CAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTG CTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTT GGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCC ATAA
Sequence Length	1704
Sequence Checksum	2470e5cb2a89d88d29edef94c6d0c6b8

Sequence

ATGTCCACTCAAATCTTAGCAACCTCATTTAAAAATGACAATATACATAA
AATTGTTCGGCCAACAACAAATTATCATCCTTCTATTTGGGGAGACCGAT
TTTTGCATTACGATATTCCAAAAGAAGAATTGAATTATAAACAAGGCCAA
GTTGAAGAATTGAAAGAAGTGGTAAGAAAGGAGATATTTGGAGAATTCTT
ATGTGATGATTGGAATAATCGATTGAAGTTAATTGATGTGGTAGAACGTT
TGGGATTGTCCTATCATTTTGAGAGTGAAATACAAAATGAGCTTCAACAC
ATTTACAACAAAATAAGCATTAATGATTCTAATTTCAAACATGAAACTTT
GCATGATGCTTCTATTCGGTTTAGACTTCTACGACAACATGGATATAGGG
TTTCTTTAGATATATTTGACAAGTTCAAAGATGAGAATGGCAACTTTAAA
GAATGTTTGGCGAGTGACACCGTTGGTTTGCTTAGCTTATATGAGGCCTC
ACATTTGAGCTGTGTTGGAGAAAATTTACTAGATGAAGCCCTTTCTTTCA
CTACCAAACACCTAACTGAATTTTTGGAAAATAATAAAAAAGAACACCCC
AATGATGATCCATTATCAAAGGAAATATCTCGAGCCCTAGAGAGGCCCTT
AAGAAAGACCCTAGTGAATCTCCATGCAAGGTATTTCATTTCAATATATG
AAAAAGATGCCTCACATAACAAAGTATTGCTACAACTTGCAAAGTTAGAT
TTCAATCTATTACAATCCATGCACAAAAAGGAGCTTAGTGAAATCTCAAG
GTGGTGGAAGGAATTAGACAGTGCACACAACTTTCCATTTGCAAGAAATA
GGATTGTGGAACTGTACATTTGGATATTAGGAGTCTATTATGAACCCCAA
TACTCTTTTGCAAGAAATATTTTAGTGAAGATCATAGCACTTTCCTCAAT
CGCTGATGATATTTATGATTCATATGGTATATTTGAAGAACATAAGCTCC
TTATTGAAGCAATTGATAGGTGGGACAAAAATTGTATGGATAAACTCCAT
CCAGAATACTTGCAGAAATATTATAAGATACTTTTGCAATCTTTTGAGGA
ATTTGAACAAGAGTTTGAAAAGGAGGAAACTTACAAAGTTTACTATGGAA
AAGAAACGTTTAAAAGATTATTAAAAGGTTATTTTGAAGAAGCTCGATGG
TTGAATGAAGGATACATGCCAAGTTTGGAGGAGCATTTAAAAGTTTCTTT
GGTTACATCTGGTTATTTCATGTTGATGGCTTGCTCTTTAGTTGGAATGA
AAAGTAACAATATTGTAACCAAACAAGTTTTCGAGTGGCTCTCCAAAGAC
CCCAAGATTGTTAGGGCAAGCGCTAGTGTTTGCAGGTACATGGATGACGT
GGCTGGTCACAAGAATGAGCAAGAGAGAAATCATATACCATCTACAATAG
AATGTTACATGAAGCAATATGGTGTATCAGAAGAAGAAGCATGTGATGAA
ATGAATAGGCGAGTGGTTATTGCATGGAAAGAAATAAACGAAGAGTTTCT
CAAACCAACTGAAGCAGCTTCACCTATATTAGTTCGTGCTCTGAATCTTG
CTAGGGTTATGGATCTTCTCTACAAAAATGGTGATAACTATACACAAGTT
GGAAAAGTCACTAAAGATAGCGTTGCTGTCTTGCTCATTGATCCAATTCC
ATAA

Sequence Length

1704

Sequence Checksum

2470e5cb2a89d88d29edef94c6d0c6b8

Summary

Resource Type	mRNA
Accession	KY014555.1
Organism	Cannabis sativa L.
Name	KY014555.1
Identifier	KY014555.1
Time Accessioned	Saturday, April 20, 2024 - 13:01
Time Last Modified	Saturday, April 20, 2024 - 13:01